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B7Q505 (B7Q505_IXOSC) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Elongation factor Tu RuleBase RU004061
Gene names
ORF Names:IscW_ISCW010766 EMBL EEC13927.1
OrganismIxodes scapularis (Black-legged tick) (Deer tick) [Reference proteome]
Taxonomic identifier6945 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Ecdysozoa › Arthropoda › Chelicerata › Arachnida › Acari › Parasitiformes › Ixodida › Ixodoidea › Ixodidae › Ixodinae › Ixodes

Protein attributes

Sequence length475 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325

Sequences

Sequence LengthMass (Da)Tools
B7Q505 [UniParc].

Last modified February 10, 2009. Version 1.
Checksum: 69C999FC1D1002E6

FASTA47552,235
        10         20         30         40         50         60 
MTSTLLGRFL CSGSGPLKAV ASKPLVAVPS AAAAACRLWV VLPRRCLATP SPAAKKVYQR 

        70         80         90        100        110        120 
EKPHCNIGTI GHVDHGKTTL TAAITKVLAE EKLAAAKKYE EIDNAPEEQA RGITINVAHV 

       130        140        150        160        170        180 
EYSTANRHYG HTDCPGHADY IKNMITGTSQ MDGAILVVAA TDGAMPQTRE HLLLAKQIGI 

       190        200        210        220        230        240 
EHIVVYLNKA DAADKEMLEL VEIELRELLT EHGYKGDEVP IVTGSALCAL EGREPDLGKD 

       250        260        270        280        290        300 
SILKLLDTVD SHIPTPQRDL DKPFLMPIES VYSIPGRGTV VTGRLDRGIV KKGMECEIVG 

       310        320        330        340        350        360 
YNKFFKTTVT GIEMFHKILE EAQAGDQLGA LIRGIKRDEV RRGMVLCKPG TIKQHDQYEA 

       370        380        390        400        410        420 
QVYVLKKEEG GRERPILKRY QPIVFSTTWD CPARITVEGR DMVMPGEDCK LIVKLFKPMA 

       430        440        450        460        470 
LEQGQRFTLR DGSRTSGTGV VTKVLNNLTP DERADLEKSE KKKEKEALKR AQKGA

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References

[1]"Annotation of Ixodes scapularis."
Ixodes scapularis Genome Project Consortium
Caler E., Hannick L.I., Bidwell S., Joardar V., Thiagarajan M., Amedeo P., Galinsky K.J., Schobel S., Inman J., Hostetler J., Miller J., Hammond M., Megy K., Lawson D., Kodira C., Sutton G., Meyer J., Hill C.A. expand/collapse author list , Birren B., Nene V., Collins F., Alarcon-Chaidez F., Wikel S., Strausberg R.
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Wikel.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		DS858703 Genomic DNA. Translation: EEC13927.1.
RefSeqXP_002401272.1. XM_002401228.1.
UniGeneIsc.5677.

3D structure databases

ProteinModelPortalB7Q505.
ModBaseSearch...

Protein-protein interaction databases

STRING6945.ISCW010766-PA.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaISCW010766-RA; ISCW010766-PA; ISCW010766.
GeneID8035998.
KEGGisc:IscW_ISCW010766.
VectorBaseISCW010766. Ixodes scapularis.

Organism-specific databases

CTD8035998.

Phylogenomic databases

eggNOGCOG0050.
KOK02358.
OMAGMECEIV.
OrthoDBEOG44QRG7.
PhylomeDBB7Q505.

Family and domain databases

InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
IPR009000. Transl_elong_init/rib_B-barrel.
[Graphical view]
PANTHERPTHR23115:SF31. PTHR23115:SF31. 1 hit.
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50465. Elong_init_C. 1 hit.
SSF52540. SSF52540. 1 hit.
SSF50447. Translat_factor. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB7Q505_IXOSC
AccessionPrimary (citable) accession number: B7Q505
Entry history
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: May 29, 2013
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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