B7PXQ7 (B7PXQ7_IXOSC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribosomal protein L8, putative EMBL EEC11379.1

Gene names

ORF Names:

IscW_ISCW020777 EMBL EEC11379.1

Organism

Ixodes scapularis (Black-legged tick) (Deer tick)

Taxonomic identifier

6945 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Arthropoda › Chelicerata › Arachnida › Acari › Parasitiformes › Ixodida › Ixodoidea › Ixodidae › Ixodinae › Ixodes

Protein attributes

Sequence length	209 AA.
Sequence status	Fragment.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein EMBL EEC11379.1
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	large ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular function	RNA binding Inferred from electronic annotation. Source: InterPro structural constituent of ribosome Inferred from electronic annotation. Source: InterPro transferase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL EEC11379.1
	Non-terminal residue	209	1	EMBL EEC11379.1

Sequences

	Sequence		Length	Mass (Da)
	B7PXQ7 [UniParc]. Last modified February 10, 2009. Version 1. Checksum: 970FF70DC6A2E6E5	FASTA	209	22,786
	10 20 30 40 50 60 LTKGISKTGG RNNQGRITSW HRGGGHKKLY RVIDFKRNKI DISAIVERIE YDPNRTAFIA 70 80 90 100 110 120 LIKYEDGEYS YILAPQKLSV GDKVISSQDA DIKIGNCLPL KFIPIGTTLH NVEMKVGKGG 130 140 150 160 170 180 QIARSAGTSV DLVGKDSGYA QIKLRSGEFR LVPLDCKATI GSISNPDQKN INLGKAGRNR 190 200 WLGWRPHVRG VAMNPVDHPH GGGEGKTSG

References

[1]

"Annotation of Ixodes scapularis." Ixodes scapularis Genome Project Consortium Caler E., Hannick L.I., Bidwell S., Joardar V., Thiagarajan M., Amedeo P., Galinsky K.J., Schobel S., Inman J., Hostetler J., Miller J., Hammond M., Megy K., Lawson D., Kodira C., Sutton G., Meyer J., Hill C.A. , Birren B., Nene V., Collins F., Alarcon-Chaidez F., Wikel S., Strausberg R. Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Wikel.

Cross-references

Sequence databases
EMBL GenBank DDBJ	DS815805 Genomic DNA. Translation: EEC11379.1.
RefSeq	XP_002401693.1. XM_002401649.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B7PXQ7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	ISCW020777-RA; ISCW020777-PA; ISCW020777.
GeneID	8032899.
KEGG	isc:IscW_ISCW020777.
VectorBase	ISCW020777. Ixodes scapularis.
Organism-specific databases
CTD	8032899.
Phylogenomic databases
GeneTree	EMGT00050000012460.
OMA	QSNINWG.
OrthoDB	EOG4W3R3V.
Family and domain databases
InterPro	IPR012340. NA-bd_OB-fold. IPR016027. NA-bd_OB-fold-like. IPR022666. Rbsml_prot_L2_RNA-bd_dom. IPR002171. Ribosomal_L2. IPR014726. Ribosomal_L2_3. IPR005880. Ribosomal_L2_bac-type. IPR022669. Ribosomal_L2_C. IPR022671. Ribosomal_L2_CS. IPR014722. Transl_SH3-like_sub. IPR008991. Translation_prot_SH3-like. [Graphical view]
Gene3D	G3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit. G3DSA:2.30.30.30. Ribosomal_L2. 1 hit. G3DSA:4.10.950.10. Ribosomal_L2. 1 hit.
PANTHER	PTHR13691:SF5. Ribosom_L2_bac. 1 hit. PTHR13691. Ribosomal_L2. 1 hit.
Pfam	PF00181. Ribosomal_L2. 1 hit. PF03947. Ribosomal_L2_C. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit. SSF50104. Transl_SH3_like. 1 hit.
TIGRFAMs	TIGR01171. RplB_bact. 1 hit.
PROSITE	PS00467. RIBOSOMAL_L2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B7PXQ7_IXOSC

Accession

Primary (citable) accession number: B7PXQ7

Entry history

Integrated into UniProtKB/TrEMBL:	February 10, 2009
Last sequence update:	February 10, 2009
Last modified:	September 21, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)