B7P7N8 (B7P7N8_IXOSC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Replication factor C large subunit, putative EMBL EEC02610.1
EC=6.5.1.2 EMBL EEC02610.1

Gene names

ORF Names:

IscW_ISCW002859 EMBL EEC02610.1

Organism

Ixodes scapularis (Black-legged tick) (Deer tick) [Reference proteome]

Taxonomic identifier

6945 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Protostomia › Ecdysozoa › Panarthropoda › Arthropoda › Chelicerata › Arachnida › Acari › Parasitiformes › Ixodida › Ixodoidea › Ixodidae › Ixodinae › Ixodes

Protein attributes

Sequence length	706 AA.
Sequence status	Fragment.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL EEC02610.1
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	DNA replication Inferred from electronic annotation. Source: InterPro
Cellular_component	DNA replication factor C complex Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW DNA clamp loader activity Inferred from electronic annotation. Source: InterPro DNA ligase (NAD+) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL EEC02610.1
	Non-terminal residue	706	1	EMBL EEC02610.1

Sequences

	Sequence		Length	Mass (Da)
	B7P7N8 [UniParc]. Last modified February 10, 2009. Version 1. Checksum: 37FDD4007BCB9EBB	FASTA	706	77,009
	10 20 30 40 50 60 GSPGCLKGVT LVITGVLECI ERDDTRALLE RCGAKVTQSV SRNTTYLVAG RDSGPAKLRK 70 80 90 100 110 120 AEECKVKILD EDGFFELIES RSGGGSSTKK GGGAEPEGAL PAEAAPEQGA PSKKRKAEAD 130 140 150 160 170 180 DEPAETKIPR VSVSPPEKAD VDAAAASTSK TSPARLPSAV RFKPSLITLT CWEQVTSPLF 190 200 210 220 230 240 RFHGCQQGQM WVDRYRPQTT KQIIGQQGDK SNCHKLRLWL QNWHKSRAGP KRPPPKWGGG 250 260 270 280 290 300 GGDGSAFKAA LLSGAPGVGK TTTANLVARE AGFSVLELNA SDTRSKKSLK QEVAELLGNQ 310 320 330 340 350 360 TLTGATTARA REGLSSKHML IMDEVDGMAG NQDRGGVQEL IALIKSTRIP IVCICNDRSH 370 380 390 400 410 420 PKMRSLVNYC FDLRFYRPQV KQIQAAMMSI ACKEGLSVTP AVVQEIIMAS NQDVRQVLHN 430 440 450 460 470 480 LSLWTARTKG ISSEQVKADT GKGTKDIRLG PFDVVRKILS SAEGGQSLSL GEKSALFFHD 490 500 510 520 530 540 YSMVPMFVQD NYIHVQPLAA QGDKKRHLRL LVEASESICQ GDLIERQIRS CGSWSLLPMQ 550 560 570 580 590 600 AFFSSVIPGE LMRGQLREMV SFPAWFGKNS SLGKRQRLLQ ELYMHMHTRV SANRTQLHMD 610 620 630 640 650 660 YLSPLLHSLT QPLIAKGADG VPSTLGLMGH YFLQRADLDT VAELSLWPGM KDPWSRVDSK 670 680 690 700 VKAALTRALN KEGFMTPYAT DDMVKKKGKR GSSKAAKGTA EPEEED

References

[1]

"Annotation of Ixodes scapularis." Ixodes scapularis Genome Project Consortium Caler E., Hannick L.I., Bidwell S., Joardar V., Thiagarajan M., Amedeo P., Galinsky K.J., Schobel S., Inman J., Hostetler J., Miller J., Hammond M., Megy K., Lawson D., Kodira C., Sutton G., Meyer J., Hill C.A. , Birren B., Nene V., Collins F., Alarcon-Chaidez F., Wikel S., Strausberg R. Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Wikel.

Cross-references

Sequence databases
EMBL GenBank DDBJ	DS652836 Genomic DNA. Translation: EEC02610.1.
RefSeq	XP_002399407.1. XM_002399366.1.
UniGene	Isc.10978.
3D structure databases
ProteinModelPortal	B7P7N8.
ModBase	Search...
Protein-protein interaction databases
STRING	6945.ISCW002859-PA. B7P7N8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	ISCW002859-RA; ISCW002859-PA; ISCW002859.
GeneID	8025839.
KEGG	isc:IscW_ISCW002859.
VectorBase	ISCW002859. Ixodes scapularis.
Organism-specific databases
CTD	8025839.
Phylogenomic databases
eggNOG	COG5275.
KO	K10754.
OMA	KLRMDER.
OrthoDB	EOG4S1RP9.
PhylomeDB	B7P7N8.
Family and domain databases
InterPro	IPR003593. AAA+_ATPase. IPR003959. ATPase_AAA_core. IPR001357. BRCT_dom. IPR008921. DNA_pol3_clamp-load_cplx_C. IPR012178. DNA_replication_fac_C_lsu. IPR013725. DNA_replication_fac_RFC1_C. [Graphical view]
Pfam	PF00004. AAA. 1 hit. PF00533. BRCT. 1 hit. PF08519. RFC1. 1 hit. [Graphical view]
PIRSF	PIRSF036578. RFC1. 1 hit.
SMART	SM00382. AAA. 1 hit. SM00292. BRCT. 1 hit. [Graphical view]
SUPFAM	SSF52113. BRCT. 1 hit. SSF48019. Pol_clamp_load_C. 1 hit.
PROSITE	PS50172. BRCT. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B7P7N8_IXOSC

Accession

Primary (citable) accession number: B7P7N8

Entry history

Integrated into UniProtKB/TrEMBL:	February 10, 2009
Last sequence update:	February 10, 2009
Last modified:	May 1, 2013
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)