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B7NZS8 (B7NZS8_RABIT) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:RPS9 EMBL ACK44303.1
OrganismOryctolagus cuniculus (Rabbit) EMBL ACK44303.1
Taxonomic identifier9986 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresLagomorphaLeporidaeOryctolagus

Protein attributes

Sequence length194 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
B7NZS8 [UniParc].

Last modified February 10, 2009. Version 1.
Checksum: E9CE3CBD59524F81

FASTA19422,591
        10         20         30         40         50         60 
MPVARSWVCR KTYVTPRRPF EKSRLDQELK LIGEYGLRNK REVWRVKFTL AKIRKAAREL 

        70         80         90        100        110        120 
LTLDEKDPRR LFEGNALLRR LVRIGVLDEG KMKLDYILGL KIEDFLERRL QTQVFKLGLA 

       130        140        150        160        170        180 
KSIHHARVLI RQRHIRVRKQ VVNIPSFIVR LDSQKHIDFS LRSPYGGGRP GRVKRKNAKK 

       190 
GQGGAGAGDD EEED 

« Hide

References

[1]"NISC Comparative Sequencing Initiative."
Antonellis A., Benjamin B., Blakesley R.W., Bouffard G.G., Brinkley C., Brooks S., Chu G., Chub I., Coleman H., Fuksenko T., Gestole M., Gregory M., Guan X., Gupta J., Gurson N., Han E., Han J., Hansen N. expand/collapse author list , Hargrove A., Hines-Harris K., Ho S.-L., Hu P., Hunter G., Hurle B., Idol J.R., Johnson T., Knight E., Kwong P., Lee-Lin S.-Q., Legaspi R., Madden M., Maduro Q.L., Maduro V.B., Margulies E.H., Masiello C., Maskeri B., McDowell J., Merkulov G., Montemayor C., Mullikin J.C., Park M., Prasad A., Ramsahoye C., Reddix-Dugue N., Riebow N., Schandler K., Schueler M.G., Sison C., Smith L., Stantripop S., Thomas J.W., Thomas P.J., Tsipouri V., Young A., Green E.D.
Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]"The initiation of mammalian protein synthesis and mRNA scanning mechanism."
Lomakin I.B., Steitz T.A.
Nature 500:307-311(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (7.01 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DP001062 Genomic DNA. Translation: ACK44303.1.
RefSeqNP_001164865.1. NM_001171394.1.
UniGeneOcu.1785.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4KZXX-ray7.81J1-194[»]
4KZYX-ray7.01J1-194[»]
4KZZX-ray7.03J1-194[»]
ProteinModelPortalB7NZS8.
SMRB7NZS8. Positions 7-177.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEB7NZS8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID100328779.

Organism-specific databases

CTD6203.

Phylogenomic databases

HOVERGENHBG001135.

Family and domain databases

Gene3D3.10.290.10. 1 hit.
InterProIPR022801. Ribosomal_S4/S9.
IPR005710. Ribosomal_S4/S9_euk/arc.
IPR001912. Ribosomal_S4/S9_N.
IPR018079. Ribosomal_S4_CS.
IPR002942. S4_RNA-bd.
[Graphical view]
PANTHERPTHR11831. PTHR11831. 1 hit.
PfamPF00163. Ribosomal_S4. 1 hit.
PF01479. S4. 1 hit.
[Graphical view]
SMARTSM00363. S4. 1 hit.
[Graphical view]
TIGRFAMsTIGR01018. rpsD_arch. 1 hit.
PROSITEPS00632. RIBOSOMAL_S4. 1 hit.
PS50889. S4. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB7NZS8_RABIT
AccessionPrimary (citable) accession number: B7NZS8
Entry history
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: December 11, 2013
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)