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Protein

30S ribosomal protein S16

Gene

rpsP

Organism
Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S16UniRule annotation
Gene namesi
Name:rpsPUniRule annotation
Ordered Locus Names:ECUMN_2934
OrganismiEscherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
Taxonomic identifieri585056 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000007097 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 828230S ribosomal protein S16PRO_1000196401Add
BLAST

Proteomic databases

PRIDEiB7N6J5.

Structurei

3D structure databases

ProteinModelPortaliB7N6J5.
SMRiB7N6J5. Positions 1-82.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S16P family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000246720.
KOiK02959.
OMAiRVEHWVG.

Family and domain databases

Gene3Di3.30.1320.10. 1 hit.
HAMAPiMF_00385. Ribosomal_S16. 1 hit.
InterProiIPR000307. Ribosomal_S16.
IPR020592. Ribosomal_S16_CS.
IPR023803. Ribosomal_S16_dom.
[Graphical view]
PANTHERiPTHR12919. PTHR12919. 1 hit.
PfamiPF00886. Ribosomal_S16. 1 hit.
[Graphical view]
SUPFAMiSSF54565. SSF54565. 1 hit.
TIGRFAMsiTIGR00002. S16. 1 hit.
PROSITEiPS00732. RIBOSOMAL_S16. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B7N6J5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVTIRLARHG AKKRPFYQVV VADSRNARNG RFIERVGFFN PIASEKEEGT
60 70 80
RLDLDRIAHW VGQGATISDR VAALIKEVNK AA
Length:82
Mass (Da):9,191
Last modified:March 24, 2009 - v1
Checksum:iF94D07049A6D489D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU928163 Genomic DNA. Translation: CAR14105.1.
RefSeqiWP_000256450.1. NC_011751.1.
YP_002413629.1. NC_011751.1.

Genome annotation databases

EnsemblBacteriaiCAR14105; CAR14105; ECUMN_2934.
GeneIDi7157695.
KEGGieum:ECUMN_2934.
PATRICi18445148. VBIEscCol32010_3115.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU928163 Genomic DNA. Translation: CAR14105.1.
RefSeqiWP_000256450.1. NC_011751.1.
YP_002413629.1. NC_011751.1.

3D structure databases

ProteinModelPortaliB7N6J5.
SMRiB7N6J5. Positions 1-82.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiB7N6J5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAR14105; CAR14105; ECUMN_2934.
GeneIDi7157695.
KEGGieum:ECUMN_2934.
PATRICi18445148. VBIEscCol32010_3115.

Phylogenomic databases

HOGENOMiHOG000246720.
KOiK02959.
OMAiRVEHWVG.

Family and domain databases

Gene3Di3.30.1320.10. 1 hit.
HAMAPiMF_00385. Ribosomal_S16. 1 hit.
InterProiIPR000307. Ribosomal_S16.
IPR020592. Ribosomal_S16_CS.
IPR023803. Ribosomal_S16_dom.
[Graphical view]
PANTHERiPTHR12919. PTHR12919. 1 hit.
PfamiPF00886. Ribosomal_S16. 1 hit.
[Graphical view]
SUPFAMiSSF54565. SSF54565. 1 hit.
TIGRFAMsiTIGR00002. S16. 1 hit.
PROSITEiPS00732. RIBOSOMAL_S16. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRS16_ECOLU
AccessioniPrimary (citable) accession number: B7N6J5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: March 24, 2009
Last modified: September 7, 2016
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.