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B7MWD9

- B7MWD9_ECO81

UniProt

B7MWD9 - B7MWD9_ECO81

Protein
Submitted name:

DNA-binding transcriptional activator, co-regulator with RcsB

Gene

rcsA

Organism
Escherichia coli O81 (strain ED1a)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 41 (01 Oct 2014)
      Sequence version 1 (14 Apr 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA binding Source: UniProtKB-KW
    2. sequence-specific DNA binding transcription factor activity Source: InterPro

    GO - Biological processi

    1. transcription, DNA-templated Source: UniProtKB-KW

    Keywords - Biological processi

    Transcription, Transcription regulationUniRule annotation

    Keywords - Ligandi

    DNA-bindingUniRule annotationSAAS annotationImported

    Enzyme and pathway databases

    BioCyciECOL585397:GJCU-2245-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA-binding transcriptional activator, co-regulator with RcsBImported
    Gene namesi
    Name:rcsAImported
    Ordered Locus Names:ECED1_2218Imported
    OrganismiEscherichia coli O81 (strain ED1a)Imported
    Taxonomic identifieri585397 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
    ProteomesiUP000000748: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi585397.ECED1_2218.

    Structurei

    3D structure databases

    ProteinModelPortaliB7MWD9.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains 1 HTH luxR-type DNA-binding domain.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG2771.
    HOGENOMiHOG000121332.
    KOiK07781.
    OMAiTIIMDSC.
    OrthoDBiEOG65TRRN.

    Family and domain databases

    Gene3Di1.10.10.10. 1 hit.
    InterProiIPR016032. Sig_transdc_resp-reg_C-effctor.
    IPR000792. Tscrpt_reg_LuxR_C.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view]
    PfamiPF00196. GerE. 1 hit.
    [Graphical view]
    PRINTSiPR00038. HTHLUXR.
    SMARTiSM00421. HTH_LUXR. 1 hit.
    [Graphical view]
    SUPFAMiSSF46894. SSF46894. 1 hit.
    PROSITEiPS00622. HTH_LUXR_1. 1 hit.
    PS50043. HTH_LUXR_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B7MWD9-1 [UniParc]FASTAAdd to Basket

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    MSTIIMDLCS YTRLGLTGYL LSRGVKKREI NDIETVDDLA IACDSQRPSV    50
    VFINEDCFIH DASNSQHIKH IINQHPNTLF IVFMAIANVH FDEYLLVRKN 100
    LLISSKSIKP ESLDDILGDI LKKETTITSF LNMPTLSLSR TESSMLRMWM 150
    AGQGTIQISD QMNIKAKTVS SHKGNIKRKI KTHNKQVIYH VVRLTDNVTN 200
    GIFVNMR 207
    Length:207
    Mass (Da):23,521
    Last modified:April 14, 2009 - v1
    Checksum:i70684B16002FD395
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CU928162 Genomic DNA. Translation: CAR08405.2.
    RefSeqiYP_002398158.1. NC_011745.1.

    Genome annotation databases

    EnsemblBacteriaiCAR08405; CAR08405; ECED1_2218.
    GeneIDi7142145.
    KEGGiecq:ECED1_2218.
    PATRICi38488484. VBIEscCol8292_2244.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CU928162 Genomic DNA. Translation: CAR08405.2 .
    RefSeqi YP_002398158.1. NC_011745.1.

    3D structure databases

    ProteinModelPortali B7MWD9.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 585397.ECED1_2218.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAR08405 ; CAR08405 ; ECED1_2218 .
    GeneIDi 7142145.
    KEGGi ecq:ECED1_2218.
    PATRICi 38488484. VBIEscCol8292_2244.

    Phylogenomic databases

    eggNOGi COG2771.
    HOGENOMi HOG000121332.
    KOi K07781.
    OMAi TIIMDSC.
    OrthoDBi EOG65TRRN.

    Enzyme and pathway databases

    BioCyci ECOL585397:GJCU-2245-MONOMER.

    Family and domain databases

    Gene3Di 1.10.10.10. 1 hit.
    InterProi IPR016032. Sig_transdc_resp-reg_C-effctor.
    IPR000792. Tscrpt_reg_LuxR_C.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view ]
    Pfami PF00196. GerE. 1 hit.
    [Graphical view ]
    PRINTSi PR00038. HTHLUXR.
    SMARTi SM00421. HTH_LUXR. 1 hit.
    [Graphical view ]
    SUPFAMi SSF46894. SSF46894. 1 hit.
    PROSITEi PS00622. HTH_LUXR_1. 1 hit.
    PS50043. HTH_LUXR_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ED1aImported.

    Entry informationi

    Entry nameiB7MWD9_ECO81
    AccessioniPrimary (citable) accession number: B7MWD9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 14, 2009
    Last sequence update: April 14, 2009
    Last modified: October 1, 2014
    This is version 41 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3