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B7MWD9

- B7MWD9_ECO81

UniProt

B7MWD9 - B7MWD9_ECO81

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Protein
Submitted name:

DNA-binding transcriptional activator, co-regulator with RcsB

Gene

rcsA

Organism
Escherichia coli O81 (strain ED1a)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW
  2. sequence-specific DNA binding transcription factor activity Source: InterPro

GO - Biological processi

  1. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciECOL585397:GJCU-2245-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA-binding transcriptional activator, co-regulator with RcsBImported
Gene namesi
Name:rcsAImported
Ordered Locus Names:ECED1_2218Imported
OrganismiEscherichia coli O81 (strain ED1a)Imported
Taxonomic identifieri585397 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000000748: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi585397.ECED1_2218.

Structurei

3D structure databases

ProteinModelPortaliB7MWD9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 HTH luxR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

eggNOGiCOG2771.
HOGENOMiHOG000121332.
KOiK07781.
OMAiTIIMDSC.
OrthoDBiEOG65TRRN.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
PROSITEiPS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B7MWD9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSTIIMDLCS YTRLGLTGYL LSRGVKKREI NDIETVDDLA IACDSQRPSV
60 70 80 90 100
VFINEDCFIH DASNSQHIKH IINQHPNTLF IVFMAIANVH FDEYLLVRKN
110 120 130 140 150
LLISSKSIKP ESLDDILGDI LKKETTITSF LNMPTLSLSR TESSMLRMWM
160 170 180 190 200
AGQGTIQISD QMNIKAKTVS SHKGNIKRKI KTHNKQVIYH VVRLTDNVTN

GIFVNMR
Length:207
Mass (Da):23,521
Last modified:April 14, 2009 - v1
Checksum:i70684B16002FD395
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU928162 Genomic DNA. Translation: CAR08405.2.
RefSeqiYP_002398158.1. NC_011745.1.

Genome annotation databases

EnsemblBacteriaiCAR08405; CAR08405; ECED1_2218.
GeneIDi7142145.
KEGGiecq:ECED1_2218.
PATRICi38488484. VBIEscCol8292_2244.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU928162 Genomic DNA. Translation: CAR08405.2 .
RefSeqi YP_002398158.1. NC_011745.1.

3D structure databases

ProteinModelPortali B7MWD9.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 585397.ECED1_2218.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAR08405 ; CAR08405 ; ECED1_2218 .
GeneIDi 7142145.
KEGGi ecq:ECED1_2218.
PATRICi 38488484. VBIEscCol8292_2244.

Phylogenomic databases

eggNOGi COG2771.
HOGENOMi HOG000121332.
KOi K07781.
OMAi TIIMDSC.
OrthoDBi EOG65TRRN.

Enzyme and pathway databases

BioCyci ECOL585397:GJCU-2245-MONOMER.

Family and domain databases

Gene3Di 1.10.10.10. 1 hit.
InterProi IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view ]
Pfami PF00196. GerE. 1 hit.
[Graphical view ]
PRINTSi PR00038. HTHLUXR.
SMARTi SM00421. HTH_LUXR. 1 hit.
[Graphical view ]
SUPFAMi SSF46894. SSF46894. 1 hit.
PROSITEi PS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ED1aImported.

Entry informationi

Entry nameiB7MWD9_ECO81
AccessioniPrimary (citable) accession number: B7MWD9
Entry historyi
Integrated into UniProtKB/TrEMBL: April 14, 2009
Last sequence update: April 14, 2009
Last modified: November 26, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3