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Protein

Lysozyme

Gene

ybcS

Organism
Escherichia coli O45:K1 (strain S88 / ExPEC)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Hydrolysis of (1->4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Antimicrobial, Bacteriolytic enzymeUniRule annotation, GlycosidaseUniRule annotation, Hydrolase

Enzyme and pathway databases

BioCyciECOL585035:GJWP-1185-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
LysozymeUniRule annotation (EC:3.2.1.17UniRule annotation)
Gene namesi
Name:ybcSImported
Ordered Locus Names:ECS88_1185Imported
OrganismiEscherichia coli O45:K1 (strain S88 / ExPEC)Imported
Taxonomic identifieri585035 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000000747 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliB7MJF8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 24 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG3772.
HOGENOMiHOG000277068.
OMAiGACRAIN.
OrthoDBiEOG60W7TZ.

Family and domain databases

Gene3Di1.10.530.40. 1 hit.
InterProiIPR002196. Glyco_hydro_24.
IPR023346. Lysozyme-like_dom.
IPR023347. Lysozyme_dom.
[Graphical view]
PfamiPF00959. Phage_lysozyme. 1 hit.
[Graphical view]
SUPFAMiSSF53955. SSF53955. 1 hit.

Sequencei

Sequence statusi: Complete.

B7MJF8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPPSLRKAVA AAIGGGAIAI ASVLITGPSG NDGLEGVSYI PYKDIVGVWT
60 70 80 90 100
VCHGHTGKDI MLGKTYTKAE CKALLNKDLA TVARQINPYI KVDIPETMRG
110 120 130 140 150
ALYSFVYNVG AGNFRTSTLL RKINQGDIKG ACDQLRRWTY AGGKQWKGLM
160
TRREIEREIC LWGQQ
Length:165
Mass (Da):18,016
Last modified:February 10, 2009 - v1
Checksum:i1A0CECC29329372C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU928161 Genomic DNA. Translation: CAR02511.1.

Genome annotation databases

EnsemblBacteriaiCAR02511; CAR02511; ECS88_1185.
PATRICi18410089. VBIEscCol91599_1184.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU928161 Genomic DNA. Translation: CAR02511.1.

3D structure databases

ProteinModelPortaliB7MJF8.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAR02511; CAR02511; ECS88_1185.
PATRICi18410089. VBIEscCol91599_1184.

Phylogenomic databases

eggNOGiCOG3772.
HOGENOMiHOG000277068.
OMAiGACRAIN.
OrthoDBiEOG60W7TZ.

Enzyme and pathway databases

BioCyciECOL585035:GJWP-1185-MONOMER.

Family and domain databases

Gene3Di1.10.530.40. 1 hit.
InterProiIPR002196. Glyco_hydro_24.
IPR023346. Lysozyme-like_dom.
IPR023347. Lysozyme_dom.
[Graphical view]
PfamiPF00959. Phage_lysozyme. 1 hit.
[Graphical view]
SUPFAMiSSF53955. SSF53955. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: S88 / ExPECImported.

Entry informationi

Entry nameiB7MJF8_ECO45
AccessioniPrimary (citable) accession number: B7MJF8
Entry historyi
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: July 22, 2015
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.