Skip Header

Contribute Send feedback
Read comments (?) or add your own

B7L2N7 (B7L2N7_METC4) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Alanine racemase HAMAP MF_01201
EC=5.1.1.1 HAMAP MF_01201
Gene names
Name:alr HAMAP MF_01201
Ordered Locus Names:Mchl_4305
OrganismMethylobacterium chloromethanicum (strain CM4 / NCIMB 13688) [Complete proteome] [HAMAP] EMBL ACK85081.1
Taxonomic identifier440085 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Methylobacteriaceae › Methylobacterium

Protein attributes

Sequence length342 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Provides the D-alanine required for cell wall biosynthesis By similarity. HAMAP MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP MF_01201 SAAS SAAS009006

Cofactor

Pyridoxal phosphate By similarity. HAMAP MF_01201 SAAS SAAS009006

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP MF_01201 SAAS SAAS009006

Cell wall biogenesis; peptidoglycan biosynthesis. HAMAP MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP MF_01201

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site221Proton acceptor; specific for D-alanine By similarity HAMAP MF_01201
Active site2381Proton acceptor; specific for L-alanine By similarity HAMAP MF_01201

Amino acid modifications

Modified residue221N6-(pyridoxal phosphate)lysine By similarity HAMAP MF_01201

Sequences

Sequence LengthMass (Da)Tools
B7L2N7 [UniParc].

Last modified February 10, 2009. Version 1.
Checksum: 6337EED6B2972263

FASTA34235,696
        10         20         30         40         50         60 
MVANWRALGA CAPQAECGAV VKADAYGCGL AAVAPALWRA GCRTFFVAHL SEGIAARKML 

        70         80         90        100        110        120 
PEAALYVLNG LPPGHAEAFR AHRLRPVLGD AQELAEWAEA MQGGGPAALH VDTGMNRLGL 

       130        140        150        160        170        180 
SVAEALALAG DPVIARAGID LVMSHLVSAE LPDDPLNARQ AADFARVRAA FPQMRASLAN 

       190        200        210        220        230        240 
SSGTCLANDA RHDLLRPGYA LFGGNPDPGQ PNPMRPVVRL EATILQVRDV EAGATCGYNA 

       250        260        270        280        290        300 
RWQAPAPRRL ATLSLGYADG YPRSASNSGH ALVGGMPCPI VGLISMDLII LDVTDASQAR 

       310        320        330        340 
RGGTATLIGD SLDIDTVGQA AGTIGYEILT SLGSRYVRNY VE

« Hide

References

[1]"Complete sequence of chromosome of Methylobacterium chloromethanicum CM4."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Marx C., Richardson P.
Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CM4 / NCIMB 13688.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001298 Genomic DNA. Translation: ACK85081.1.
RefSeqYP_002423009.1. NC_011757.1.

3D structure databases

ProteinModelPortalB7L2N7.
ModBaseSearch...

Protein-protein interaction databases

STRINGB7L2N7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7116468.
GenomeReviewsGene locus Mchl_4305 in contig CP001298_GR.
KEGGmch:Mchl_4305.
PATRIC22502869. VBIMetChl132133_4252.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG712172.
OMASMDLIIL.
ProtClustDBCLSK2331904.

Family and domain databases

HAMAPMF_01201. Ala_racemase.
[Tree]
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
Gene3DG3DSA:2.40.37.10. Ala_racemase/Decarboxylase_C. 1 hit.
KOK01775.
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. Alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB7L2N7_METC4
AccessionPrimary (citable) accession number: B7L2N7
Entry history
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: January 25, 2012
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info