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B7KVH3

- B7KVH3_METC4

UniProt

B7KVH3 - B7KVH3_METC4

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Mchl_3561

Organism
Methylobacterium extorquens (strain CM4 / NCIMB 13688) (Methylobacterium chloromethanicum)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 34 (01 Oct 2014)
      Sequence version 1 (10 Feb 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciMCHL440085:GCXT-3623-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Mchl_3561Imported
    OrganismiMethylobacterium extorquens (strain CM4 / NCIMB 13688) (Methylobacterium chloromethanicum)Imported
    Taxonomic identifieri440085 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesMethylobacteriaceaeMethylobacterium
    ProteomesiUP000002385: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi440085.Mchl_3561.

    Structurei

    3D structure databases

    ProteinModelPortaliB7KVH3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000036007.
    KOiK01971.
    OMAiKSASTHN.
    OrthoDBiEOG6Q8HXT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B7KVH3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNDFAHLLDR LAYEPRRNAK LRLLQDFFAG TPDPERGWAL AAMTGGLTFR    50
    EAKPALIRGL VEERVDPVLF SLSHNYVGDL AETTALIWPG PEENPFPRMR 100
    GEGALKDEAL PESPPHRGLP ARSAGDEVGR ALSPQAGRGD PPGPGHNNPP 150
    PSVPTLAEVV ETLASTPKRE LPQHLAHWLD ALDETGRWAL LKLVTGNLRV 200
    GVSARLAKTA VGALGGHEAD AVEEVWHGLK PPYTELFAWV EGRGERPESR 250
    NPAPFRPPML SHPVEEFEDL DKLEPEAFSA EWKWDGIRVQ LAGGRDSQGR 300
    QVQKVYSRTG EDISDAFPDL AEAITFDGAI DGELLILREG RVQSFNVLQQ 350
    RLNRKAVTGK LLEEFPAHVR AYDVLAAEGE DLRPLPFAER RPRLETLVRR 400
    LDHARIDLSP LVPFATWDEV AAARADPASA GAGADADAIE GVMLKRLNSP 450
    YLPGRPKGPW WKWKREPYVV DAVMMYAQRG HGKRSSFYSD YTFGCWREGA 500
    EGEELVPVGK AYHGFTDAEL QKLDRYVRNH TTKRFGPVRE VAYGREAGLV 550
    LEIAFEGVQR STRHKSGVAM RFPRVSRIRW DKPAAEADRV DVLERILARG 600
    EREVAPGAAM EASE 614
    Length:614
    Mass (Da):68,146
    Last modified:February 10, 2009 - v1
    Checksum:i243B18D62F204F2A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001298 Genomic DNA. Translation: ACK84381.1.
    RefSeqiYP_002422309.1. NC_011757.1.

    Genome annotation databases

    EnsemblBacteriaiACK84381; ACK84381; Mchl_3561.
    GeneIDi7113694.
    KEGGimch:Mchl_3561.
    PATRICi22501404. VBIMetChl132133_3524.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001298 Genomic DNA. Translation: ACK84381.1 .
    RefSeqi YP_002422309.1. NC_011757.1.

    3D structure databases

    ProteinModelPortali B7KVH3.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 440085.Mchl_3561.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACK84381 ; ACK84381 ; Mchl_3561 .
    GeneIDi 7113694.
    KEGGi mch:Mchl_3561.
    PATRICi 22501404. VBIMetChl132133_3524.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000036007.
    KOi K01971.
    OMAi KSASTHN.
    OrthoDBi EOG6Q8HXT.

    Enzyme and pathway databases

    BioCyci MCHL440085:GCXT-3623-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome of Methylobacterium chloromethanicum CM4."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Marx C., Richardson P.
      Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CM4 / NCIMB 13688Imported.

    Entry informationi

    Entry nameiB7KVH3_METC4
    AccessioniPrimary (citable) accession number: B7KVH3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 10, 2009
    Last sequence update: February 10, 2009
    Last modified: October 1, 2014
    This is version 34 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3