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B7KVH3 (B7KVH3_METC4) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length614 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
B7KVH3 [UniParc].

Last modified February 10, 2009. Version 1.
Checksum: 243B18D62F204F2A

FASTA61468,146
        10         20         30         40         50         60 
MNDFAHLLDR LAYEPRRNAK LRLLQDFFAG TPDPERGWAL AAMTGGLTFR EAKPALIRGL 

        70         80         90        100        110        120 
VEERVDPVLF SLSHNYVGDL AETTALIWPG PEENPFPRMR GEGALKDEAL PESPPHRGLP 

       130        140        150        160        170        180 
ARSAGDEVGR ALSPQAGRGD PPGPGHNNPP PSVPTLAEVV ETLASTPKRE LPQHLAHWLD 

       190        200        210        220        230        240 
ALDETGRWAL LKLVTGNLRV GVSARLAKTA VGALGGHEAD AVEEVWHGLK PPYTELFAWV 

       250        260        270        280        290        300 
EGRGERPESR NPAPFRPPML SHPVEEFEDL DKLEPEAFSA EWKWDGIRVQ LAGGRDSQGR 

       310        320        330        340        350        360 
QVQKVYSRTG EDISDAFPDL AEAITFDGAI DGELLILREG RVQSFNVLQQ RLNRKAVTGK 

       370        380        390        400        410        420 
LLEEFPAHVR AYDVLAAEGE DLRPLPFAER RPRLETLVRR LDHARIDLSP LVPFATWDEV 

       430        440        450        460        470        480 
AAARADPASA GAGADADAIE GVMLKRLNSP YLPGRPKGPW WKWKREPYVV DAVMMYAQRG 

       490        500        510        520        530        540 
HGKRSSFYSD YTFGCWREGA EGEELVPVGK AYHGFTDAEL QKLDRYVRNH TTKRFGPVRE 

       550        560        570        580        590        600 
VAYGREAGLV LEIAFEGVQR STRHKSGVAM RFPRVSRIRW DKPAAEADRV DVLERILARG 

       610 
EREVAPGAAM EASE 

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References

[1]"Complete sequence of chromosome of Methylobacterium chloromethanicum CM4."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Marx C., Richardson P.
Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CM4 / NCIMB 13688.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001298 Genomic DNA. Translation: ACK84381.1.
RefSeqYP_002422309.1. NC_011757.1.

3D structure databases

ProteinModelPortalB7KVH3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING440085.Mchl_3561.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACK84381; ACK84381; Mchl_3561.
GeneID7113694.
KEGGmch:Mchl_3561.
PATRIC22501404. VBIMetChl132133_3524.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000036007.
KOK01971.
OMAGQPYPFF.
OrthoDBEOG6Q8HXT.
ProtClustDBCLSK2331597.

Enzyme and pathway databases

BioCycMCHL440085:GCXT-3623-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB7KVH3_METC4
AccessionPrimary (citable) accession number: B7KVH3
Entry history
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: November 13, 2013
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)