B7KVH3 (B7KVH3_METC4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ACK84381.1

Gene names

Ordered Locus Names:

Mchl_3561 EMBL ACK84381.1

Organism

Methylobacterium extorquens (strain CM4 / NCIMB 13688) (Methylobacterium chloromethanicum) [Complete proteome] [HAMAP] EMBL ACK84381.1

Taxonomic identifier

440085 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Methylobacteriaceae › Methylobacterium › Methylobacterium extorquens group › Methylobacterium extorquens

Protein attributes

Sequence length	614 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ACK84381.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B7KVH3 [UniParc]. Last modified February 10, 2009. Version 1. Checksum: 243B18D62F204F2A	FASTA	614	68,146
	10 20 30 40 50 60 MNDFAHLLDR LAYEPRRNAK LRLLQDFFAG TPDPERGWAL AAMTGGLTFR EAKPALIRGL 70 80 90 100 110 120 VEERVDPVLF SLSHNYVGDL AETTALIWPG PEENPFPRMR GEGALKDEAL PESPPHRGLP 130 140 150 160 170 180 ARSAGDEVGR ALSPQAGRGD PPGPGHNNPP PSVPTLAEVV ETLASTPKRE LPQHLAHWLD 190 200 210 220 230 240 ALDETGRWAL LKLVTGNLRV GVSARLAKTA VGALGGHEAD AVEEVWHGLK PPYTELFAWV 250 260 270 280 290 300 EGRGERPESR NPAPFRPPML SHPVEEFEDL DKLEPEAFSA EWKWDGIRVQ LAGGRDSQGR 310 320 330 340 350 360 QVQKVYSRTG EDISDAFPDL AEAITFDGAI DGELLILREG RVQSFNVLQQ RLNRKAVTGK 370 380 390 400 410 420 LLEEFPAHVR AYDVLAAEGE DLRPLPFAER RPRLETLVRR LDHARIDLSP LVPFATWDEV 430 440 450 460 470 480 AAARADPASA GAGADADAIE GVMLKRLNSP YLPGRPKGPW WKWKREPYVV DAVMMYAQRG 490 500 510 520 530 540 HGKRSSFYSD YTFGCWREGA EGEELVPVGK AYHGFTDAEL QKLDRYVRNH TTKRFGPVRE 550 560 570 580 590 600 VAYGREAGLV LEIAFEGVQR STRHKSGVAM RFPRVSRIRW DKPAAEADRV DVLERILARG 610 EREVAPGAAM EASE

References

[1]

"Complete sequence of chromosome of Methylobacterium chloromethanicum CM4." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Marx C., Richardson P. Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CM4 / NCIMB 13688.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001298 Genomic DNA. Translation: ACK84381.1.
RefSeq	YP_002422309.1. NC_011757.1.
3D structure databases
ProteinModelPortal	B7KVH3.
ModBase	Search...
Protein-protein interaction databases
STRING	440085.Mchl_3561.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACK84381; ACK84381; Mchl_3561.
GeneID	7113694.
KEGG	mch:Mchl_3561.
PATRIC	22501404. VBIMetChl132133_3524.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000036007.
KO	K01971.
OMA	AYDLLEW.
ProtClustDB	CLSK2331597.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR04120. DNA_lig_bact. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B7KVH3_METC4

Accession

Primary (citable) accession number: B7KVH3

Entry history

Integrated into UniProtKB/TrEMBL:	February 10, 2009
Last sequence update:	February 10, 2009
Last modified:	May 1, 2013
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)