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B7KUN1 (B7KUN1_METC4) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
DNA topoisomerase IV, B subunit EMBL ACK84260.1
EC=5.99.1.3 EMBL ACK84260.1
Gene names
Ordered Locus Names:Mchl_3440
OrganismMethylobacterium chloromethanicum (strain CM4 / NCIMB 13688) [Complete proteome] [HAMAP] EMBL ACK84260.1
Taxonomic identifier440085 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Methylobacteriaceae › Methylobacterium

Protein attributes

Sequence length685 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionIsomerase EMBL ACK84260.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processDNA topological change

Inferred from electronic annotation. Source: InterPro

   Cellular componentchromosome

Inferred from electronic annotation. Source: InterPro

   Molecular functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

DNA topoisomerase (ATP-hydrolyzing) activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B7KUN1 [UniParc].

Last modified February 10, 2009. Version 1.
Checksum: D57379EFF3E4E17F

FASTA68574,837
        10         20         30         40         50         60 
MSDPARDLFG PGAKPPPAEA ERRRRLTPVA PSPAPAPETA EAGYDASAIE VLEGLEPVRR 

        70         80         90        100        110        120 
RPGMYIGGTD ERALHHLFAE VIDNSMDEAV AGHASFIEVE LEESGSLVVT DNGRGIPVDP 

       130        140        150        160        170        180 
HPKFPGKSAL EVIMTTLHAG GKFDSKVYET SGGLHGVGIS VVNALSDVLE VEVARNQTLY 

       190        200        210        220        230        240 
RQCFSRGHAQ GSLETIGRVQ NRRGTRVRFH PDAQIFGSLK FDPRRLFKMA RSKAYLFGGV 

       250        260        270        280        290        300 
EIRWRCAPAL LEGLEDVPAE AVHRFPGGLS DYLARDIEGK ELVLDSIFSG KITKPGSHGS 

       310        320        330        340        350        360 
LEWAVAWTVA DDGVSHSYCN TIPTPEGGTH EAGLRVALLR ALREHAERVN QAKRMTAVTT 

       370        380        390        400        410        420 
DDVMATCASM LSVFIREPEF QGQTKDKLAT VEASRIVETA IRDAFDHWLA ASPAQANKLL 

       430        440        450        460        470        480 
DWVIDRAEER LRRRQEKEVA RKSATRKLRL PGKLADCSAA GTVGSEIFIV EGDSAGGSAK 

       490        500        510        520        530        540 
QARDRATQAV LPLRGKILNV ASASRDKLGA NQLISDLTLA LGCGTGANFR EADLRYDRVI 

       550        560        570        580        590        600 
IMTDADVDGA HIASLLITFF YRQMPKLIDK GHLYLAIPPL YRISQGAKSA YARDDADKER 

       610        620        630        640        650        660 
IIKTVFKNGK VEIGRFKGLG EMMPAQLKET TMDPKKRTLL RVAILDEARE STGDTVERLM 

       670        680 
GNKPEARFAF ITERASFADG TELDI

« Hide

References

[1]"Complete sequence of chromosome of Methylobacterium chloromethanicum CM4."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Marx C., Richardson P.
Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CM4 / NCIMB 13688.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001298 Genomic DNA. Translation: ACK84260.1.
RefSeqYP_002422188.1. NC_011757.1.

3D structure databases

ProteinModelPortalB7KUN1.
ModBaseSearch...

Protein-protein interaction databases

STRINGB7KUN1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7114196.
GenomeReviewsGene locus Mchl_3440 in contig CP001298_GR.
KEGGmch:Mchl_3440.
PATRIC22501154. VBIMetChl132133_3400.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG304889.
OMAQARDKEF.
ProtClustDBPRK05559.

Family and domain databases

InterProIPR003594. ATPase-like_ATP-bd.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
IPR001241. Topo_IIA.
IPR013759. Topo_IIA_B/N_ab.
IPR002288. Topo_IIA_B_C.
IPR013506. Topo_IIA_bsu_dom2.
IPR013760. Topo_IIA_cen.
IPR018522. TopoIIA_CS.
IPR005737. TopoIV_B_Gneg.
IPR006171. Toprim_domain.
[Graphical view]
Gene3DG3DSA:3.30.565.10. ATP_bd_ATPase. 1 hit.
G3DSA:3.30.230.10. Ribosomal_S5_D2-type_fold. 1 hit.
G3DSA:3.40.50.670. Topo_IIA_B/N_ab. 1 hit.
KOK02622.
PfamPF00204. DNA_gyraseB. 1 hit.
PF00986. DNA_gyraseB_C. 1 hit.
PF02518. HATPase_c. 1 hit.
PF01751. Toprim. 1 hit.
[Graphical view]
PRINTSPR00418. TPI2FAMILY.
SMARTSM00387. HATPase_c. 1 hit.
SM00433. TOP2c. 1 hit.
[Graphical view]
SUPFAMSSF55874. ATP_bd_ATPase. 1 hit.
SSF54211. Ribosomal_S5_D2-typ_fold. 1 hit.
SSF56719. Topo_IIA_cen. 1 hit.
TIGRFAMsTIGR01055. ParE_Gneg. 1 hit.
PROSITEPS00177. TOPOISOMERASE_II. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB7KUN1_METC4
AccessionPrimary (citable) accession number: B7KUN1
Entry history
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: January 25, 2012
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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