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Protein
Submitted name:

Diguanylate cyclase/phosphodiesterase with GAF sensor

Gene

PCC7424_3673

Organism
Cyanothece sp. (strain PCC 7424) (Synechococcus sp. (strain ATCC 29155))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. photoreceptor activity Source: UniProtKB-KW

GO - Biological processi

  1. detection of visible light Source: InterPro
  2. protein-chromophore linkage Source: UniProtKB-KW
  3. regulation of transcription, DNA-templated Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Photoreceptor proteinUniRule annotation, Receptor

Keywords - Biological processi

Sensory transduction

Keywords - Ligandi

Chromophore

Enzyme and pathway databases

BioCyciCSP65393:GJP7-3718-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Diguanylate cyclase/phosphodiesterase with GAF sensorImported
Gene namesi
Ordered Locus Names:PCC7424_3673Imported
OrganismiCyanothece sp. (strain PCC 7424) (Synechococcus sp. (strain ATCC 29155))Imported
Taxonomic identifieri65393 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesCyanothece
ProteomesiUP000002384 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi65393.PCC7424_3673.

Structurei

3D structure databases

ProteinModelPortaliB7KHV9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2203.
HOGENOMiHOG000069568.
OMAiAIHQGEL.
OrthoDBiEOG6G4VQG.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
3.30.450.40. 4 hits.
InterProiIPR001633. EAL_dom.
IPR003018. GAF.
IPR029016. GAF_dom_like.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR016132. Phyto_chromo_attachment.
IPR013515. Phytochrome_cen-reg.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF01590. GAF. 2 hits.
PF00990. GGDEF. 2 hits.
PF00360. PHY. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00065. GAF. 3 hits.
SM00267. GGDEF. 2 hits.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 2 hits.
SSF55781. SSF55781. 3 hits.
TIGRFAMsiTIGR00254. GGDEF. 2 hits.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 2 hits.
PS50046. PHYTOCHROME_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B7KHV9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNETNSNQEQ LLLKITNLIH HNLDFTDTIQ KITQAAQDFL KIDRVTIYQF
60 70 80 90 100
AQDGSGEVIA ESTTPTRLPS LLGLHFPASD IPSKSLEQFA KLRSSSIIDV
110 120 130 140 150
SAKRKTINSF NEYSDGKSNT LYIPTYSTVD PCHLQYLLAM GVLSSLSMPI
160 170 180 190 200
FYWDQLWGLL IAHHSEPRRF SREELWTIEL WCRQISLALA QNTLVSQFQK
210 220 230 240 250
QKQQEHFIET INRLIDNQSN LSECWQKILL ETLKTLQADG ARLYIVSELT
260 270 280 290 300
GQGDQLYTYG SQPLFPQLEE QPQWQQLMKG KLSQPDDSSY PSTRPFTCTL
310 320 330 340 350
AQLSADPQYH LLSKAFGNQS IQSFLFIPLR SRSQWVGCLT LFRQEQEWET
360 370 380 390 400
LWAGQQKLDQ HNSTPRQSFS PWCEIQRGVR EWSTDELKLA EVLGLHLYMI
410 420 430 440 450
VIQQRLTRLI RHQASYDVIT QLPNGIIFNH RLSLALVDAV NQGNMLGVVI
460 470 480 490 500
LDLNQFKRIN DSLGHGVGDF LLTKVRDRLQ NALDTYSIFN PLLARWHGAR
510 520 530 540 550
FIILLSKLSY SDESVMVCQK LLNDFQEPFY VQSQAIYLGA SLGIALAPYD
560 570 580 590 600
GDTAEILLKN AESAMYEAKK QGKNTYQIYR PGSDHDKNKL ILEADLRKAI
610 620 630 640 650
ERNEFVLHYQ PQIDLNTRKL IGVEALIRWQ HPSLGMVSPA LFIPLAEETG
660 670 680 690 700
LICPLGEWVL RTACHQYRIW QKAGFPKIQM AVNLSAFQLQ QDDIVARIAM
710 720 730 740 750
ILKETGMTPS DLELEITETT VMENLEQMTA ILEQLKQMGI KIAIDDFGTG
760 770 780 790 800
YSSLNVLKHL PVDTLKIDKS FVQDITLDSN DAKLCQGIIM LGKAFELDVL
810 820 830 840 850
AEGVETFTQL EFLRSLNCDR AQGYLISRPL APDALIELLL KAQTLIPSPS
860 870 880 890 900
SQEVNLLHSS SPSWPNSIIP NSPHQLDYHP PMIETGSPYI KIESFEAKNS
910 920 930 940 950
QNLQEYLYLK QEIQQQANRE RIIMDVAQKI RASLNLDDIL NTTVSEIRHL
960 970 980 990 1000
LNTDRVFIYR FDENWVGKVV VESVACPEFS ILGEWIDEPC FRDQYVKYYR
1010 1020 1030 1040 1050
QGRIKAIEDI AQIELTPCHR ELLNRYQVKA NLVLPIVYQD KLWGLLIAHD
1060 1070 1080 1090 1100
CRKPRKWQDH EITLLSQIAI GAAIAIHQGE LYQQLESANL ELKKLSCLDG
1110 1120 1130 1140 1150
LTQVANRHRF DMYLDQEWRR LMRSQQFLSL ILCDVDHFKG YNDTYGHLAG
1160 1170 1180 1190 1200
DQCLQQVAQV IKNAVGRPAD LVARYGGEEF AIILPDTPLR GALYVAEQIR
1210 1220 1230 1240 1250
QQVQYLTIPH PQSTHQWVTL SSGVASFIPS AALSPKALIN AADEALYQAK
1260
ANGRNQVVFS PS
Length:1,262
Mass (Da):143,816
Last modified:February 9, 2009 - v1
Checksum:i2DABE14D336BB105
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001291 Genomic DNA. Translation: ACK72056.1.
RefSeqiWP_015955649.1. NC_011729.1.
YP_002378924.1. NC_011729.1.

Genome annotation databases

EnsemblBacteriaiACK72056; ACK72056; PCC7424_3673.
KEGGicyc:PCC7424_3673.
PATRICi21556338. VBICyaSp136448_3770.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001291 Genomic DNA. Translation: ACK72056.1.
RefSeqiWP_015955649.1. NC_011729.1.
YP_002378924.1. NC_011729.1.

3D structure databases

ProteinModelPortaliB7KHV9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi65393.PCC7424_3673.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACK72056; ACK72056; PCC7424_3673.
KEGGicyc:PCC7424_3673.
PATRICi21556338. VBICyaSp136448_3770.

Phylogenomic databases

eggNOGiCOG2203.
HOGENOMiHOG000069568.
OMAiAIHQGEL.
OrthoDBiEOG6G4VQG.

Enzyme and pathway databases

BioCyciCSP65393:GJP7-3718-MONOMER.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
3.30.450.40. 4 hits.
InterProiIPR001633. EAL_dom.
IPR003018. GAF.
IPR029016. GAF_dom_like.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR016132. Phyto_chromo_attachment.
IPR013515. Phytochrome_cen-reg.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF01590. GAF. 2 hits.
PF00990. GGDEF. 2 hits.
PF00360. PHY. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00065. GAF. 3 hits.
SM00267. GGDEF. 2 hits.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 2 hits.
SSF55781. SSF55781. 3 hits.
TIGRFAMsiTIGR00254. GGDEF. 2 hits.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 2 hits.
PS50046. PHYTOCHROME_2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Novel metabolic attributes of the genus Cyanothece, comprising a group of unicellular nitrogen-fixing Cyanobacteria."
    Bandyopadhyay A., Elvitigala T., Welsh E., Stockel J., Liberton M., Min H., Sherman L.A., Pakrasi H.B.
    MBio 2:E214-E214(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 7424Imported.

Entry informationi

Entry nameiB7KHV9_CYAP7
AccessioniPrimary (citable) accession number: B7KHV9
Entry historyi
Integrated into UniProtKB/TrEMBL: February 9, 2009
Last sequence update: February 9, 2009
Last modified: March 31, 2015
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.