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B7KDM3 (B7KDM3_CYAP7) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Diguanylate cyclase/phosphodiesterase with Chase sensor EMBL ACK70325.1
Gene names
Ordered Locus Names:PCC7424_1893 EMBL ACK70325.1
OrganismCyanothece sp. (strain PCC 7424) (Synechococcus sp. (strain ATCC 29155)) [Complete proteome] [HAMAP] EMBL ACK70325.1
Taxonomic identifier65393 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Oscillatoriophycideae › Chroococcales › Cyanothece

Protein attributes

Sequence length865 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 4646 Potential EMBL ACK70325.1
Chain47 – 865819 Potential
PRO_5000418318

Sequences

Sequence LengthMass (Da)Tools
B7KDM3 [UniParc].

Last modified February 10, 2009. Version 1.
Checksum: 968536616313F945

FASTA86598,867
        10         20         30         40         50         60 
MKVKPLQKIQ WLVSKMPFLP KKSSLETKAV LSQISFTFVA SLAIAGLVIG VRQSKILQPV 

        70         80         90        100        110        120 
ELDIYDQMVK LSPQLPADPR LLIIEITEDD IRKQNRWPLS DETINQLINT VQQYDPKVIG 

       130        140        150        160        170        180 
LDLFRDVPHP PGSDKLTQTL AADNIIAVKK LNDDGSSELK LHQGITDERA GFADIPIDFD 

       190        200        210        220        230        240 
NVLRRYLLYA RVNEKPLYSF ALRVSLKYLN NDHFPFKVHP EALQIGSTVF EDLKADSGSY 

       250        260        270        280        290        300 
QMEPEEVIGW QILLKYRSDD LEESGRNVAR KISLTEVLQG KLEPSWVKDK IVLIGTTAPS 

       310        320        330        340        350        360 
EKDMFATPYS QGETINYFMP GVVIHAQMVS QILSTVLDQQ QQFCFFPQWG EFLWIWGWCF 

       370        380        390        400        410        420 
IGGIVVWRFN SPQYFIGIGL MIISGLWGFG FLVFTQSGWI PVLPPILGLI ATGGTVLIYK 

       430        440        450        460        470        480 
FVSNYYYDSL TYLPNRRFFV SQLQKMNKHQ KADNSELTAV YFLDIDRFKV INEGLGHEAG 

       490        500        510        520        530        540 
DFVLLETAQR LQGQLNNKAQ LARVGGDEFA IWLNSLVSID EATEIANYLQ QILNQPFFWK 

       550        560        570        580        590        600 
GQEIYTSVSI GIAFNRTGAK FNSEELLRDA NIAMYQAKNS GKVHYEMFAS GMREQVINRL 

       610        620        630        640        650        660 
QIETDLRRSI KQQEFQLFYQ PIISLKTGKI AGVEALVRWK SVKRGFISPG EFIPIAEETG 

       670        680        690        700        710        720 
LIIPLGEWIL QEACSQMRQW HQQFSQNPPL FISVNLSGRQ FSQPNLVQQV QYILETINLE 

       730        740        750        760        770        780 
RNTLKLEITE SMMMNDVEAA IDLLRRLKDL GLRLSIDDFG TGYSNLSYLH RFPIDTLKID 

       790        800        810        820        830        840 
QSFVRRMNSQ ESQDRYAQIV RTVIMLGHNL ELDVIAEGIE TEEQMHILKS LGCEYGQGYY 

       850        860 
FAKPLPSPEV TELLKKDPQW LTFKP

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References

[1]"Novel metabolic attributes of the genus Cyanothece, comprising a group of unicellular nitrogen-fixing Cyanobacteria."
Bandyopadhyay A., Elvitigala T., Welsh E., Stockel J., Liberton M., Min H., Sherman L.A., Pakrasi H.B.
MBio 2:E214-E214(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 7424.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001291 Genomic DNA. Translation: ACK70325.1.
RefSeqYP_002377193.1. NC_011729.1.

3D structure databases

ProteinModelPortalB7KDM3.
ModBaseSearch...

Protein-protein interaction databases

STRING65393.PCC7424_1893.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACK70325; ACK70325; PCC7424_1893.
GeneID7109894.
KEGGcyc:PCC7424_1893.
PATRIC21552634. VBICyaSp136448_1939.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3706.
HOGENOMHOG000054747.
OMAESMMMND.
ProtClustDBCLSK2404583.

Enzyme and pathway databases

BioCycCSP65393:GJP7-1915-MONOMER.

Family and domain databases

Gene3D3.20.20.450. 1 hit.
InterProIPR001054. A/G_cyclase.
IPR007890. CHASE2.
IPR001633. Diguanylate_PEstase_EAL_dom.
IPR000160. GGDEF_dom.
[Graphical view]
PfamPF05226. CHASE2. 1 hit.
PF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
[Graphical view]
SMARTSM01080. CHASE2. 1 hit.
SM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
[Graphical view]
SUPFAMSSF55073. A/G_cyclase. 1 hit.
SSF141868. SSF141868. 1 hit.
TIGRFAMsTIGR00254. GGDEF. 1 hit.
PROSITEPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB7KDM3_CYAP7
AccessionPrimary (citable) accession number: B7KDM3
Entry history
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: May 1, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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