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Protein
Submitted name:

Diguanylate cyclase/phosphodiesterase with Chase sensor

Gene

PCC7424_1893

Organism
Cyanothece sp. (strain PCC 7424) (Synechococcus sp. (strain ATCC 29155))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciCSP65393:GJP7-1915-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Diguanylate cyclase/phosphodiesterase with Chase sensorImported
Gene namesi
Ordered Locus Names:PCC7424_1893Imported
OrganismiCyanothece sp. (strain PCC 7424) (Synechococcus sp. (strain ATCC 29155))Imported
Taxonomic identifieri65393 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesCyanothece
ProteomesiUP000002384 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 4646 PotentialImportedAdd
BLAST
Chaini47 – 865819 PotentialImportedPRO_5000418318Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi65393.PCC7424_1893.

Structurei

3D structure databases

ProteinModelPortaliB7KDM3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG3706.
HOGENOMiHOG000054747.
OMAiESMMMND.
OrthoDBiEOG69GZGV.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
InterProiIPR007890. CHASE2.
IPR001633. EAL_dom.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
[Graphical view]
PfamiPF05226. CHASE2. 1 hit.
PF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
[Graphical view]
SMARTiSM01080. CHASE2. 1 hit.
SM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

B7KDM3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKVKPLQKIQ WLVSKMPFLP KKSSLETKAV LSQISFTFVA SLAIAGLVIG
60 70 80 90 100
VRQSKILQPV ELDIYDQMVK LSPQLPADPR LLIIEITEDD IRKQNRWPLS
110 120 130 140 150
DETINQLINT VQQYDPKVIG LDLFRDVPHP PGSDKLTQTL AADNIIAVKK
160 170 180 190 200
LNDDGSSELK LHQGITDERA GFADIPIDFD NVLRRYLLYA RVNEKPLYSF
210 220 230 240 250
ALRVSLKYLN NDHFPFKVHP EALQIGSTVF EDLKADSGSY QMEPEEVIGW
260 270 280 290 300
QILLKYRSDD LEESGRNVAR KISLTEVLQG KLEPSWVKDK IVLIGTTAPS
310 320 330 340 350
EKDMFATPYS QGETINYFMP GVVIHAQMVS QILSTVLDQQ QQFCFFPQWG
360 370 380 390 400
EFLWIWGWCF IGGIVVWRFN SPQYFIGIGL MIISGLWGFG FLVFTQSGWI
410 420 430 440 450
PVLPPILGLI ATGGTVLIYK FVSNYYYDSL TYLPNRRFFV SQLQKMNKHQ
460 470 480 490 500
KADNSELTAV YFLDIDRFKV INEGLGHEAG DFVLLETAQR LQGQLNNKAQ
510 520 530 540 550
LARVGGDEFA IWLNSLVSID EATEIANYLQ QILNQPFFWK GQEIYTSVSI
560 570 580 590 600
GIAFNRTGAK FNSEELLRDA NIAMYQAKNS GKVHYEMFAS GMREQVINRL
610 620 630 640 650
QIETDLRRSI KQQEFQLFYQ PIISLKTGKI AGVEALVRWK SVKRGFISPG
660 670 680 690 700
EFIPIAEETG LIIPLGEWIL QEACSQMRQW HQQFSQNPPL FISVNLSGRQ
710 720 730 740 750
FSQPNLVQQV QYILETINLE RNTLKLEITE SMMMNDVEAA IDLLRRLKDL
760 770 780 790 800
GLRLSIDDFG TGYSNLSYLH RFPIDTLKID QSFVRRMNSQ ESQDRYAQIV
810 820 830 840 850
RTVIMLGHNL ELDVIAEGIE TEEQMHILKS LGCEYGQGYY FAKPLPSPEV
860
TELLKKDPQW LTFKP
Length:865
Mass (Da):98,867
Last modified:February 9, 2009 - v1
Checksum:i968536616313F945
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001291 Genomic DNA. Translation: ACK70325.1.
RefSeqiWP_012599268.1. NC_011729.1.
YP_002377193.1. NC_011729.1.

Genome annotation databases

EnsemblBacteriaiACK70325; ACK70325; PCC7424_1893.
KEGGicyc:PCC7424_1893.
PATRICi21552634. VBICyaSp136448_1939.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001291 Genomic DNA. Translation: ACK70325.1.
RefSeqiWP_012599268.1. NC_011729.1.
YP_002377193.1. NC_011729.1.

3D structure databases

ProteinModelPortaliB7KDM3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi65393.PCC7424_1893.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACK70325; ACK70325; PCC7424_1893.
KEGGicyc:PCC7424_1893.
PATRICi21552634. VBICyaSp136448_1939.

Phylogenomic databases

eggNOGiCOG3706.
HOGENOMiHOG000054747.
OMAiESMMMND.
OrthoDBiEOG69GZGV.

Enzyme and pathway databases

BioCyciCSP65393:GJP7-1915-MONOMER.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
InterProiIPR007890. CHASE2.
IPR001633. EAL_dom.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
[Graphical view]
PfamiPF05226. CHASE2. 1 hit.
PF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
[Graphical view]
SMARTiSM01080. CHASE2. 1 hit.
SM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Novel metabolic attributes of the genus Cyanothece, comprising a group of unicellular nitrogen-fixing Cyanobacteria."
    Bandyopadhyay A., Elvitigala T., Welsh E., Stockel J., Liberton M., Min H., Sherman L.A., Pakrasi H.B.
    MBio 2:E214-E214(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 7424Imported.

Entry informationi

Entry nameiB7KDM3_CYAP7
AccessioniPrimary (citable) accession number: B7KDM3
Entry historyi
Integrated into UniProtKB/TrEMBL: February 9, 2009
Last sequence update: February 9, 2009
Last modified: March 31, 2015
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.