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B7KBU8

- B7KBU8_CYAP7

UniProt

B7KBU8 - B7KBU8_CYAP7

Protein

Alpha-amylase

Gene

PCC7424_4716

Organism
Cyanothece sp. (strain PCC 7424) (Synechococcus sp. (strain ATCC 29155))
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 40 (01 Oct 2014)
      Sequence version 1 (10 Feb 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotation, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Enzyme and pathway databases

    BioCyciCSP65393:GJP7-4768-MONOMER.

    Protein family/group databases

    CAZyiGH13. Glycoside Hydrolase Family 13.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    Ordered Locus Names:PCC7424_4716Imported
    OrganismiCyanothece sp. (strain PCC 7424) (Synechococcus sp. (strain ATCC 29155))Imported
    Taxonomic identifieri65393 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesCyanothece
    ProteomesiUP000002384: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 3434 PotentialImportedAdd
    BLAST
    Chaini35 – 458424 PotentialImportedPRO_5000418232Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi65393.PCC7424_4716.

    Structurei

    3D structure databases

    ProteinModelPortaliB7KBU8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000069715.
    KOiK01176.
    OMAiWQRYQPQ.
    OrthoDBiEOG6K6V4W.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    B7KBU8-1 [UniParc]FASTAAdd to Basket

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    MNYQISNFFK TCTILTLVFL VCFLTGLIPP ANADVIYHAF NEPFDQIRAE    50
    IPQLKEQGYT YIQISPPQLS NPSSEWWARY QPIDFTVLES PLGNEEDLKE 100
    LIDAAHQQEE KIIVDVVLNH MANYGDYPYT LQYPRFSPDN FHPRVCIQNY 150
    DDAYQATHGW LGLDCNSGQG GLPDLNTESD YVRQELKNYL TTLLDLGVDG 200
    FRIDALKHIE EGFFQTVLND IPDNIYFYGE VVEGRPIDAL RYIGIHNIDV 250
    TDYPLLGAIK NALGLGGDLR SLMNPASYNA ALPGPNAVTF AKTHDTLPGS 300
    LLYSSYGMDQ LDSLLANAFV LSREDGLPLI YRDDAEEPIV QAGVKFHEQM 350
    TGQAQYFRSG NEIAAEADNP NLLFIERGNE GIAMINKSGN FFDVPIAQMP 400
    GLDVGCYQEL HYNFTMSVGL DQNGQKIITR WGNPTRGGIQ IGPRDALFFV 450
    KSADQTCQ 458
    Length:458
    Mass (Da):51,297
    Last modified:February 10, 2009 - v1
    Checksum:iE3B5F84C7845E7AA
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001291 Genomic DNA. Translation: ACK73076.1.
    RefSeqiWP_015956659.1. NC_011729.1.
    YP_002379944.1. NC_011729.1.

    Genome annotation databases

    EnsemblBacteriaiACK73076; ACK73076; PCC7424_4716.
    GeneIDi7109327.
    KEGGicyc:PCC7424_4716.
    PATRICi21558464. VBICyaSp136448_4827.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001291 Genomic DNA. Translation: ACK73076.1 .
    RefSeqi WP_015956659.1. NC_011729.1.
    YP_002379944.1. NC_011729.1.

    3D structure databases

    ProteinModelPortali B7KBU8.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 65393.PCC7424_4716.

    Protein family/group databases

    CAZyi GH13. Glycoside Hydrolase Family 13.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACK73076 ; ACK73076 ; PCC7424_4716 .
    GeneIDi 7109327.
    KEGGi cyc:PCC7424_4716.
    PATRICi 21558464. VBICyaSp136448_4827.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000069715.
    KOi K01176.
    OMAi WQRYQPQ.
    OrthoDBi EOG6K6V4W.

    Enzyme and pathway databases

    BioCyci CSP65393:GJP7-4768-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Novel metabolic attributes of the genus Cyanothece, comprising a group of unicellular nitrogen-fixing Cyanobacteria."
      Bandyopadhyay A., Elvitigala T., Welsh E., Stockel J., Liberton M., Min H., Sherman L.A., Pakrasi H.B.
      MBio 2:E214-E214(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PCC 7424Imported.

    Entry informationi

    Entry nameiB7KBU8_CYAP7
    AccessioniPrimary (citable) accession number: B7KBU8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 10, 2009
    Last sequence update: February 10, 2009
    Last modified: October 1, 2014
    This is version 40 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3