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Protein
Submitted name:

Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S)

Gene

PCC7424_1608

Organism
Cyanothece sp. (strain PCC 7424) (Synechococcus sp. (strain ATCC 29155))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S)Imported
Gene namesi
Ordered Locus Names:PCC7424_1608Imported
OrganismiCyanothece sp. (strain PCC 7424) (Synechococcus sp. (strain ATCC 29155))Imported
Taxonomic identifieri65393 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeOscillatorialesCyanothecaceaeCyanothece
Proteomesi
  • UP000002384 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei20 – 37HelicalSequence analysisAdd BLAST18
Transmembranei49 – 70HelicalSequence analysisAdd BLAST22
Transmembranei82 – 101HelicalSequence analysisAdd BLAST20
Transmembranei132 – 150HelicalSequence analysisAdd BLAST19
Transmembranei157 – 177HelicalSequence analysisAdd BLAST21
Transmembranei189 – 210HelicalSequence analysisAdd BLAST22
Transmembranei222 – 245HelicalSequence analysisAdd BLAST24
Transmembranei257 – 276HelicalSequence analysisAdd BLAST20

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi65393.PCC7424_1608.

Structurei

3D structure databases

ProteinModelPortaliB7K9S9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini335 – 413PAS (PER-ARNT-SIM)InterPro annotationAdd BLAST79
Domaini408 – 459PAC (PAS-associated C-terminal)InterPro annotationAdd BLAST52
Domaini456 – 501PAS (PER-ARNT-SIM)InterPro annotationAdd BLAST46
Domaini528 – 580PAC (PAS-associated C-terminal)InterPro annotationAdd BLAST53
Domaini613 – 746GGDEFInterPro annotationAdd BLAST134
Domaini755 – 1011EALInterPro annotationAdd BLAST257

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105BZU. Bacteria.
COG2199. LUCA.
COG2200. LUCA.
OMAiERACDEM.
OrthoDBiPOG091H049G.

Family and domain databases

CDDicd01948. EAL. 1 hit.
cd01949. GGDEF. 1 hit.
Gene3Di3.20.20.450. 1 hit.
InterProiIPR001633. EAL_dom.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013656. PAS_4.
IPR013767. PAS_fold.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF00989. PAS. 1 hit.
PF08448. PAS_4. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 2 hits.
SM00091. PAS. 2 hits.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 2 hits.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 2 hits.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 2 hits.
PS50112. PAS. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B7K9S9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTVQYDRRLL NSLKIGSRII SIIVILVGCT VLVGWYYDIQ VLKSVMPGWV
60 70 80 90 100
TMKANTALGF VLSGLSLYFL QSSNYRKQQL SQGLALIVFL LGLLTSSQYL
110 120 130 140 150
FGWNLGIDQL LFKEELKQSV LSKPGRMAPE TALNYIFMGS ALWVLAIKPV
160 170 180 190 200
RFRLVQLLIS ITSIISIQVL VGYIYQVKPL VGLASNNQVA IHTSILFLLL
210 220 230 240 250
CVGILCANPC KGWMRLIASN SAGGIIARSL LPAAFILPLG LGWLVEGSGW
260 270 280 290 300
MDVAFGQSFH VIGNIVVFIG LILYCAKELY RMDLQRHRAE EALRSAYDDL
310 320 330 340 350
DLKVQERTSK LFQAYETLAA EIEERKRAEA AQKASQKNLQ TFIDNTSAAI
360 370 380 390 400
YLKDLQGKFL LVNRQLEKLV GLKREQMIGK TDGDVFPEDI ADAFVVNDRQ
410 420 430 440 450
VLQAGESLSL EEQIIVERQL RTYLSVKFPL YDPNGLLYGI GGISTDITER
460 470 480 490 500
KQAEEALRQQ ANLLDLAYEA ILVRDGNNVI TFWNQGAEQL YGWKKSQALG
510 520 530 540 550
QVSHILLQTE FNLSSPHFDA ILRLTGHWEG ELTHTRQDGT KIIVESRQVL
560 570 580 590 600
VQDDRGQIKG ILEVNRDITE RKLAQFQLEH NALHDALTEL PNRLLLMERI
610 620 630 640 650
QAAIQRAKRK PHYHFALLFI DLDRFKTIND TLGHLVGDHL LVAIATRLQH
660 670 680 690 700
CVRSGDTVAR LGGDEFIILL DDLLEESDAF PITERILGRI KEPLVINNQQ
710 720 730 740 750
IQTSASIGIV FNRDGNESET DLLRNADLAM YSAKEQGKSR YAVFNPTMHL
760 770 780 790 800
RAHTLWEIEN NLRTALDGQE FLLHYQPIFS LTTQTLVGFE ALIRWRHPVR
810 820 830 840 850
GLISPMDFIP VAEETGLIVP IGEWVLQEAC RQLLHWQELN PGAKCCFMSI
860 870 880 890 900
NLSSRQLESG NFIAVIDQIL QQTPLSAKNL KLEITETLLM KNLEAASALL
910 920 930 940 950
LELKNRAIGV SIDDFGTGYS SLSYLCHLPV DSLKIDRSFV AKMDKGRESL
960 970 980 990 1000
QVIQAIISLA HQLNLEVIAE GIETQDHLTQ LHHLKCEYGQ GYFLSKPLDS
1010
EKATQLICSS PVVCL
Length:1,015
Mass (Da):114,045
Last modified:February 10, 2009 - v1
Checksum:iFE2271E495076F5B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001291 Genomic DNA. Translation: ACK70047.1.

Genome annotation databases

EnsemblBacteriaiACK70047; ACK70047; PCC7424_1608.
KEGGicyc:PCC7424_1608.
PATRICi21552050. VBICyaSp136448_1648.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001291 Genomic DNA. Translation: ACK70047.1.

3D structure databases

ProteinModelPortaliB7K9S9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi65393.PCC7424_1608.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACK70047; ACK70047; PCC7424_1608.
KEGGicyc:PCC7424_1608.
PATRICi21552050. VBICyaSp136448_1648.

Phylogenomic databases

eggNOGiENOG4105BZU. Bacteria.
COG2199. LUCA.
COG2200. LUCA.
OMAiERACDEM.
OrthoDBiPOG091H049G.

Family and domain databases

CDDicd01948. EAL. 1 hit.
cd01949. GGDEF. 1 hit.
Gene3Di3.20.20.450. 1 hit.
InterProiIPR001633. EAL_dom.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013656. PAS_4.
IPR013767. PAS_fold.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF00989. PAS. 1 hit.
PF08448. PAS_4. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 2 hits.
SM00091. PAS. 2 hits.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 2 hits.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 2 hits.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 2 hits.
PS50112. PAS. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB7K9S9_CYAP7
AccessioniPrimary (citable) accession number: B7K9S9
Entry historyi
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: November 2, 2016
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.