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Protein
Submitted name:

Putative PAS/PAC sensor protein

Gene

PCC8801_2570

Organism
Cyanothece sp. (strain PCC 8801) (Synechococcus sp. (strain PCC 8801 / RF-1))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciCSP41431:GHLK-2596-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative PAS/PAC sensor proteinImported
Gene namesi
Ordered Locus Names:PCC8801_2570Imported
OrganismiCyanothece sp. (strain PCC 8801) (Synechococcus sp. (strain PCC 8801 / RF-1))Imported
Taxonomic identifieri41431 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesCyanothece
Proteomesi
  • UP000008204 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei20 – 3920HelicalSequence analysisAdd
BLAST
Transmembranei355 – 37824HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi41431.PCC8801_2570.

Structurei

3D structure databases

ProteinModelPortaliB7K4S0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini375 – 42753HAMPInterPro annotationAdd
BLAST
Domaini582 – 61332PAS (PER-ARNT-SIM)InterPro annotationAdd
BLAST
Domaini640 – 69253PAC (PAS-associated C-terminal)InterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili419 – 45638Sequence analysisAdd
BLAST
Coiled coili694 – 72128Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105BZU. Bacteria.
ENOG410XNMH. LUCA.
HOGENOMiHOG000069704.
OMAiHELAQAN.
OrthoDBiEOG6S7XQP.

Family and domain databases

InterProiIPR033479. dCache_1.
IPR003660. HAMP_dom.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013767. PAS_fold.
IPR001932. PPM-type_phosphatase_dom.
[Graphical view]
PfamiPF02743. dCache_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00989. PAS. 1 hit.
PF13426. PAS_9. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 2 hits.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 2 hits.
SSF81606. SSF81606. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50885. HAMP. 1 hit.
PS50113. PAC. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B7K4S0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLITLLQKFQ YKIPLRTVLV VPFVIQIVGA VGLVGYLSFR NGQKAVEDLA
60 70 80 90 100
GQLTNEVSNV IIERLNSYLG TPHLVNQLNK NALNLGQLNL QNIKAIERHF
110 120 130 140 150
WQQAQVFELV SKIQFAGVDG KFIGLAINDD GTLDYQERDR SGDLQTYAIN
160 170 180 190 200
SQGNRRERLR TYIGFDARLQ PWYIASERAG KPVWSQIYPW VSPPTLAITL
210 220 230 240 250
GESYYDKNGK FQGVLATDLT LLQISDFLRS LKIGRSGKTF IIESSGQLVA
260 270 280 290 300
SSSAKSPFLM VDNQPQRLSA TNLEDSLIRP AAFYLQKTLG NIKTASPEDI
310 320 330 340 350
IPIDIPQKLK FKIHGKHHFM KVLPFQDDFG LDWYIVIVVP ESDFMQQIEA
360 370 380 390 400
NNKTTFALVI AALILATTLG LLTSRWIVEL ILQLNQAAQQ IAEGNLKTKV
410 420 430 440 450
NIKGIKELES LGITFNVMAN QIKDYFEALE AKNEDLEQAK ADLLEAKEKL
460 470 480 490 500
ETILDAVPGS ISWIDSQGFY LGVNRYLSDK WNLPAEEFIG KPIGFLQGND
510 520 530 540 550
HLIEFLFSFL ESSKDADSQV VEITFNDCLE YYLIAAQKYQ GGNATVSIGI
560 570 580 590 600
NITERKKAEE KLTQTVKELS DIKYALDQLA IVTITDAQGN INYVNDKFCE
610 620 630 640 650
VSQYSPEELI GNNHRILKSG YHDRAFYKEL WSTISSGQIW QGEIKNKTKD
660 670 680 690 700
GAFYWVNSTI IPFLDKTGRP FQYLSIRTEI TARKELEQTL ESIVSKRTAQ
710 720 730 740 750
LAAANQEITD LNNKLRLENV RMSAELNVVF QMQQMILPKV EELRGIEGLE
760 770 780 790 800
LAGFMKPAAE VGGDYYDVLH HDGIVTLGIG DVTGHGLESG ILMVMTQTAV
810 820 830 840 850
RTLKEIGETD PIRFLSALNR TIYQNLQRMN SDKNLSLGIL HYYQRQLRIS
860 870 880 890 900
GQHEEILLVR SGGKIERINT IDLGFPIGLD HDISHFVDQV CVELNPGDGV
910 920 930 940 950
ILYTDGITEA KDINRNFYGL NRLCDVVSQS WQKSAQEIQE AVIEDVYQHI
960
GEQKVFDDIT LLVLKQK
Length:967
Mass (Da):108,952
Last modified:February 10, 2009 - v1
Checksum:iF88DAD7A03356AEE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001287 Genomic DNA. Translation: ACK66576.1.
RefSeqiWP_012595843.1. NC_011726.1.

Genome annotation databases

EnsemblBacteriaiACK66576; ACK66576; PCC8801_2570.
KEGGicyp:PCC8801_2570.
PATRICi21577449. VBICyaSp125535_2743.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001287 Genomic DNA. Translation: ACK66576.1.
RefSeqiWP_012595843.1. NC_011726.1.

3D structure databases

ProteinModelPortaliB7K4S0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi41431.PCC8801_2570.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACK66576; ACK66576; PCC8801_2570.
KEGGicyp:PCC8801_2570.
PATRICi21577449. VBICyaSp125535_2743.

Phylogenomic databases

eggNOGiENOG4105BZU. Bacteria.
ENOG410XNMH. LUCA.
HOGENOMiHOG000069704.
OMAiHELAQAN.
OrthoDBiEOG6S7XQP.

Enzyme and pathway databases

BioCyciCSP41431:GHLK-2596-MONOMER.

Family and domain databases

InterProiIPR033479. dCache_1.
IPR003660. HAMP_dom.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013767. PAS_fold.
IPR001932. PPM-type_phosphatase_dom.
[Graphical view]
PfamiPF02743. dCache_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00989. PAS. 1 hit.
PF13426. PAS_9. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 2 hits.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 2 hits.
SSF81606. SSF81606. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50885. HAMP. 1 hit.
PS50113. PAC. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Novel metabolic attributes of the genus Cyanothece, comprising a group of unicellular nitrogen-fixing Cyanobacteria."
    Bandyopadhyay A., Elvitigala T., Welsh E., Stockel J., Liberton M., Min H., Sherman L.A., Pakrasi H.B.
    MBio 2:E214-E214(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 8801Imported.

Entry informationi

Entry nameiB7K4S0_CYAP8
AccessioniPrimary (citable) accession number: B7K4S0
Entry historyi
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: June 8, 2016
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.