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Protein
Submitted name:

Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S)

Gene

PCC8801_1348

Organism
Cyanothece sp. (strain PCC 8801) (Synechococcus sp. (strain PCC 8801 / RF-1))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. signal transducer activity Source: InterPro

GO - Biological processi

  1. regulation of transcription, DNA-templated Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciCSP41431:GHLK-1358-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S)Imported
Gene namesi
Ordered Locus Names:PCC8801_1348Imported
OrganismiCyanothece sp. (strain PCC 8801) (Synechococcus sp. (strain PCC 8801 / RF-1))Imported
Taxonomic identifieri41431 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesCyanothece
ProteomesiUP000008204 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi41431.PCC8801_1348.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2199.
HOGENOMiHOG000136246.
OMAiHIHYLED.
OrthoDBiEOG69GZGV.

Family and domain databases

Gene3Di2.60.200.20. 1 hit.
3.20.20.450. 1 hit.
InterProiIPR001633. EAL_dom.
IPR000253. FHA_dom.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR000014. PAS.
IPR013767. PAS_fold.
IPR008984. SMAD_FHA_domain.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00498. FHA. 1 hit.
PF00990. GGDEF. 1 hit.
PF00989. PAS. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00240. FHA. 1 hit.
SM00267. GGDEF. 1 hit.
SM00091. PAS. 2 hits.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF49879. SSF49879. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
PS50006. FHA_DOMAIN. 1 hit.
PS50887. GGDEF. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B7K4E5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNASEVRHV LIISDSKSRR IVPLTESTYS IGRDPNTNIL LYDRQVSRHH
60 70 80 90 100
ATILQVTNDQ GEQPLYRIID GDLQGKRSTN GITINGKNCL SHDLKSGDEI
110 120 130 140 150
RFGSKCYANY HIIINSEDLD SLKEEECQSD TLVKSDSLDL SLFKTSMNQT
160 170 180 190 200
DEEIKPDFLE IGQKNSNKIA LEENYLESPD DLASLTQGNP NPIIEINFEG
210 220 230 240 250
EITYLNISAR VKFPTLQQDL SKHPILEGLI VGSSTQKGTS FVREIQIEHA
260 270 280 290 300
FFEQHIHYLE DKKAIRLYLF DITKYKTREA KLTTGKDRYR LFVEQATEGI
310 320 330 340 350
LLVNCETQYI IEANQAYCHL LGYTTAEIIG LSLHQLIAID KAIIDQELSC
360 370 380 390 400
VTSETPYFIK ESIHRHKDGS LISVSGKINR TTYQGQEIFC LVIRDIRDRK
410 420 430 440 450
QAEEQLQYQA LHDPLTNLPN RESFNQKLVL ALDHAQRYQH LMAVMFVDID
460 470 480 490 500
SFTNINNTLG PSIGDRLLDS FGKRLSSCVR TGDTVARWGS DEFVLLLPQI
510 520 530 540 550
KNTEDTVKLA QRIFDNLQVP FILDDHRLPV KCSIGIAVYP QDGEAGETLL
560 570 580 590 600
KNAGTALGRT KEQGRNHYQF YNPNLSSEAA LLLRLESLLH QGLEKKQFFL
610 620 630 640 650
HYQPQINLKT KKVVGMEALL RWEHPSLGII NPQKFIPLAE KTDLILHLGK
660 670 680 690 700
WVLQTACEQN ISWQKDGLPP ISIGVNLSAR EVQQPNLAEV VARVLNDTGL
710 720 730 740 750
DPQWLELELT EMSLRQHLTQ ARKSLRDLKN LGVRIALDDF GTGFSSLGYL
760 770 780 790 800
QQFSFRTLKL HQAFIRDLRG TSEELGIISA ALAISKGFNM RIVAEGVETE
810 820 830 840
EQLKILSNLN CEEIQGYCFS RPLPVKEATV FLQNAARGSL
Length:840
Mass (Da):95,058
Last modified:February 10, 2009 - v1
Checksum:i219F9AC43ECDEEFE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001287 Genomic DNA. Translation: ACK65410.1.
RefSeqiWP_012594684.1. NC_011726.1.
YP_002371566.1. NC_011726.1.

Genome annotation databases

EnsemblBacteriaiACK65410; ACK65410; PCC8801_1348.
KEGGicyp:PCC8801_1348.
PATRICi21574931. VBICyaSp125535_1499.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001287 Genomic DNA. Translation: ACK65410.1.
RefSeqiWP_012594684.1. NC_011726.1.
YP_002371566.1. NC_011726.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi41431.PCC8801_1348.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACK65410; ACK65410; PCC8801_1348.
KEGGicyp:PCC8801_1348.
PATRICi21574931. VBICyaSp125535_1499.

Phylogenomic databases

eggNOGiCOG2199.
HOGENOMiHOG000136246.
OMAiHIHYLED.
OrthoDBiEOG69GZGV.

Enzyme and pathway databases

BioCyciCSP41431:GHLK-1358-MONOMER.

Family and domain databases

Gene3Di2.60.200.20. 1 hit.
3.20.20.450. 1 hit.
InterProiIPR001633. EAL_dom.
IPR000253. FHA_dom.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR000014. PAS.
IPR013767. PAS_fold.
IPR008984. SMAD_FHA_domain.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00498. FHA. 1 hit.
PF00990. GGDEF. 1 hit.
PF00989. PAS. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00240. FHA. 1 hit.
SM00267. GGDEF. 1 hit.
SM00091. PAS. 2 hits.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF49879. SSF49879. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
PS50006. FHA_DOMAIN. 1 hit.
PS50887. GGDEF. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Novel metabolic attributes of the genus Cyanothece, comprising a group of unicellular nitrogen-fixing Cyanobacteria."
    Bandyopadhyay A., Elvitigala T., Welsh E., Stockel J., Liberton M., Min H., Sherman L.A., Pakrasi H.B.
    MBio 2:E214-E214(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 8801Imported.

Entry informationi

Entry nameiB7K4E5_CYAP8
AccessioniPrimary (citable) accession number: B7K4E5
Entry historyi
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: April 1, 2015
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.