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Protein

tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG

Gene

mnmG

Organism
Cyanothece sp. (strain PCC 8801) (Synechococcus sp. (strain PCC 8801 / RF-1))
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm5s2U34.UniRule annotation

Cofactori

Protein has several cofactor binding sites:
  • FADSAAS annotation
  • FADUniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi15 – 206FADUniRule annotation
Nucleotide bindingi276 – 29015NADUniRule annotationAdd
BLAST

GO - Molecular functioni

  1. flavin adenine dinucleotide binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. tRNA wobble uridine modification Source: InterPro
Complete GO annotation...

Keywords - Biological processi

tRNA processingUniRule annotation

Keywords - Ligandi

FADUniRule annotationSAAS annotation, Flavoprotein, NADUniRule annotation

Enzyme and pathway databases

BioCyciCSP41431:GHLK-2932-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmGUniRule annotation
Alternative name(s):
Glucose-inhibited division protein AUniRule annotation
Gene namesi
Name:mnmGUniRule annotation
Synonyms:gidAUniRule annotation
Ordered Locus Names:PCC8801_2900Imported
OrganismiCyanothece sp. (strain PCC 8801) (Synechococcus sp. (strain PCC 8801 / RF-1))Imported
Taxonomic identifieri41431 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesCyanothece
ProteomesiUP000008204: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotation

Interactioni

Subunit structurei

Homodimer. Heterotetramer of two MnmE and two MnmG subunits.UniRule annotation

Protein-protein interaction databases

STRINGi41431.PCC8801_2900.

Structurei

3D structure databases

ProteinModelPortaliB7JV45.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the MnmG family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0445.
HOGENOMiHOG000201060.
KOiK03495.
OMAiYINGLST.
OrthoDBiEOG6W9X6J.

Family and domain databases

HAMAPiMF_00129. MnmG_GidA.
InterProiIPR004416. GidA.
IPR026904. GidA-assoc_3.
IPR002218. GIDA-rel.
IPR020595. GIDA-rel_CS.
[Graphical view]
PfamiPF01134. GIDA. 1 hit.
PF13932. GIDA_assoc_3. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00136. gidA. 1 hit.
PROSITEiPS01280. GIDA_1. 1 hit.
PS01281. GIDA_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B7JV45-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTIDFQDQFD VIVVGAGHAG CEAALASARL GCRTLMLTLN LDKIAWQPCN
60 70 80 90 100
PAVGGPAKSQ LTHEVDALGG EIGKMADRTY LQKRVLNASR GPAVWALRAQ
110 120 130 140 150
TDKREYAAIM KEIVENQDNL SIREAMATDL ILGKNEEVIG VQTYFGTCFG
160 170 180 190 200
AKAVILTTGT FLGGRIWIGN KSMEAGRAGE FASVGLSETL NRLGFEVGRL
210 220 230 240 250
KTGTPARVDK RSVDYSNLET QPPDDEIRWF SFDPDAWIER EQMNCYITRT
260 270 280 290 300
TSQTHQLIKD NLHLSPIYGG FIDSKGPRYC PSIEDKIVRF ADKDSHQIFI
310 320 330 340 350
EPEGREIPEL YIQGFSTGLP ENIQLAMLRT LPGLENCVML RPAYAVEYDY
360 370 380 390 400
LPATQCYPTL MTKKIEGLFC AGQINGTTGY EEAAAQGIVA GINAVRFVKK
410 420 430 440 450
QEMIIFAREE SYLGTLIDDL CTKDLREPYR MLTSRSEYRL ILRSDNADQR
460 470 480 490 500
LTPLGREIGL IDDRRWQLFQ DKQANIIAEK ERLHETRIKE KDEVAITIVN
510 520 530 540 550
DTNQKIKGSI TLADLLRRPQ FHYIDLERYG LGNAQLNSVE KEGAEIDIKY
560 570 580 590 600
SGYLKRQQNQ IDQISRQSNR QLPEDLNYMK IETLSMEARE KLNKIKPLTL
610 620 630
GQASRIGGVN PADINALLVY LELRSRQSVN S
Length:631
Mass (Da):70,950
Last modified:February 10, 2009 - v1
Checksum:i5E5C2E6EC561EEA2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001287 Genomic DNA. Translation: ACK66897.1.
RefSeqiYP_002373053.1. NC_011726.1.

Genome annotation databases

EnsemblBacteriaiACK66897; ACK66897; PCC8801_2900.
GeneIDi7105972.
KEGGicyp:PCC8801_2900.
PATRICi21578118. VBICyaSp125535_3073.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001287 Genomic DNA. Translation: ACK66897.1.
RefSeqiYP_002373053.1. NC_011726.1.

3D structure databases

ProteinModelPortaliB7JV45.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi41431.PCC8801_2900.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACK66897; ACK66897; PCC8801_2900.
GeneIDi7105972.
KEGGicyp:PCC8801_2900.
PATRICi21578118. VBICyaSp125535_3073.

Phylogenomic databases

eggNOGiCOG0445.
HOGENOMiHOG000201060.
KOiK03495.
OMAiYINGLST.
OrthoDBiEOG6W9X6J.

Enzyme and pathway databases

BioCyciCSP41431:GHLK-2932-MONOMER.

Family and domain databases

HAMAPiMF_00129. MnmG_GidA.
InterProiIPR004416. GidA.
IPR026904. GidA-assoc_3.
IPR002218. GIDA-rel.
IPR020595. GIDA-rel_CS.
[Graphical view]
PfamiPF01134. GIDA. 1 hit.
PF13932. GIDA_assoc_3. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00136. gidA. 1 hit.
PROSITEiPS01280. GIDA_1. 1 hit.
PS01281. GIDA_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Novel metabolic attributes of the genus Cyanothece, comprising a group of unicellular nitrogen-fixing Cyanobacteria."
    Bandyopadhyay A., Elvitigala T., Welsh E., Stockel J., Liberton M., Min H., Sherman L.A., Pakrasi H.B.
    MBio 2:E214-E214(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 8801Imported.

Entry informationi

Entry nameiB7JV45_CYAP8
AccessioniPrimary (citable) accession number: B7JV45
Entry historyi
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: January 7, 2015
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.