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B7JV45 (B7JV45_CYAP8) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG HAMAP-Rule MF_00129
Alternative name(s):
Glucose-inhibited division protein A HAMAP-Rule MF_00129
Gene names
Name:mnmG HAMAP-Rule MF_00129
Synonyms:gidA HAMAP-Rule MF_00129
Ordered Locus Names:PCC8801_2900 EMBL ACK66897.1
OrganismCyanothece sp. (strain PCC 8801) (Synechococcus sp. (strain PCC 8801 / RF-1)) [Complete proteome] [HAMAP] EMBL ACK66897.1
Taxonomic identifier41431 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesCyanothece

Protein attributes

Sequence length631 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm5s2U34 By similarity. HAMAP-Rule MF_00129

Cofactor

FAD By similarity. HAMAP-Rule MF_00129 SAAS SAAS026904

Subunit structure

Homodimer. Heterotetramer of two MnmE and two MnmG subunits By similarity. HAMAP-Rule MF_00129

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00129.

Sequence similarities

Belongs to the MnmG family. HAMAP-Rule MF_00129

Ontologies

Keywords
   Biological processtRNA processing HAMAP-Rule MF_00129
   Cellular componentCytoplasm HAMAP-Rule MF_00129
   LigandFAD HAMAP-Rule MF_00129 SAAS SAAS026904
Flavoprotein
NAD HAMAP-Rule MF_00129
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtRNA wobble uridine modification

Inferred from electronic annotation. Source: InterPro

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionflavin adenine dinucleotide binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding15 – 206FAD By similarity HAMAP-Rule MF_00129
Nucleotide binding276 – 29015NAD By similarity HAMAP-Rule MF_00129

Sequences

Sequence LengthMass (Da)Tools
B7JV45 [UniParc].

Last modified February 10, 2009. Version 1.
Checksum: 5E5C2E6EC561EEA2

FASTA63170,950
        10         20         30         40         50         60 
MTIDFQDQFD VIVVGAGHAG CEAALASARL GCRTLMLTLN LDKIAWQPCN PAVGGPAKSQ 

        70         80         90        100        110        120 
LTHEVDALGG EIGKMADRTY LQKRVLNASR GPAVWALRAQ TDKREYAAIM KEIVENQDNL 

       130        140        150        160        170        180 
SIREAMATDL ILGKNEEVIG VQTYFGTCFG AKAVILTTGT FLGGRIWIGN KSMEAGRAGE 

       190        200        210        220        230        240 
FASVGLSETL NRLGFEVGRL KTGTPARVDK RSVDYSNLET QPPDDEIRWF SFDPDAWIER 

       250        260        270        280        290        300 
EQMNCYITRT TSQTHQLIKD NLHLSPIYGG FIDSKGPRYC PSIEDKIVRF ADKDSHQIFI 

       310        320        330        340        350        360 
EPEGREIPEL YIQGFSTGLP ENIQLAMLRT LPGLENCVML RPAYAVEYDY LPATQCYPTL 

       370        380        390        400        410        420 
MTKKIEGLFC AGQINGTTGY EEAAAQGIVA GINAVRFVKK QEMIIFAREE SYLGTLIDDL 

       430        440        450        460        470        480 
CTKDLREPYR MLTSRSEYRL ILRSDNADQR LTPLGREIGL IDDRRWQLFQ DKQANIIAEK 

       490        500        510        520        530        540 
ERLHETRIKE KDEVAITIVN DTNQKIKGSI TLADLLRRPQ FHYIDLERYG LGNAQLNSVE 

       550        560        570        580        590        600 
KEGAEIDIKY SGYLKRQQNQ IDQISRQSNR QLPEDLNYMK IETLSMEARE KLNKIKPLTL 

       610        620        630 
GQASRIGGVN PADINALLVY LELRSRQSVN S 

« Hide

References

[1]"Novel metabolic attributes of the genus Cyanothece, comprising a group of unicellular nitrogen-fixing Cyanobacteria."
Bandyopadhyay A., Elvitigala T., Welsh E., Stockel J., Liberton M., Min H., Sherman L.A., Pakrasi H.B.
MBio 2:E214-E214(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 8801.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001287 Genomic DNA. Translation: ACK66897.1.
RefSeqYP_002373053.1. NC_011726.1.

3D structure databases

ProteinModelPortalB7JV45.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING41431.PCC8801_2900.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACK66897; ACK66897; PCC8801_2900.
GeneID7105972.
KEGGcyp:PCC8801_2900.
PATRIC21578118. VBICyaSp125535_3073.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0445.
HOGENOMHOG000201060.
KOK03495.
OMAHTNEQTH.
OrthoDBEOG6W9X6J.

Enzyme and pathway databases

BioCycCSP41431:GHLK-2932-MONOMER.

Family and domain databases

HAMAPMF_00129. MnmG_GidA.
InterProIPR004416. GidA.
IPR026904. GidA-assoc_3.
IPR002218. GIDA-rel.
IPR020595. GIDA-rel_CS.
[Graphical view]
PfamPF01134. GIDA. 1 hit.
PF13932. GIDA_assoc_3. 1 hit.
[Graphical view]
TIGRFAMsTIGR00136. gidA. 1 hit.
PROSITEPS01280. GIDA_1. 1 hit.
PS01281. GIDA_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB7JV45_CYAP8
AccessionPrimary (citable) accession number: B7JV45
Entry history
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: June 11, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)