Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Ribulose bisphosphate carboxylase, small subunit

Gene

cbbS-1

Organism
Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciAFER243159:GH3S-3047-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose bisphosphate carboxylase, small subunitImported (EC:4.1.1.39Imported)
Gene namesi
Name:cbbS-1Imported
Ordered Locus Names:AFE_3052Imported
OrganismiAcidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270))Imported
Taxonomic identifieri243159 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAcidithiobacillalesAcidithiobacillaceaeAcidithiobacillus
ProteomesiUP000001362 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi243159.AFE_3052.

Structurei

3D structure databases

ProteinModelPortaliB7JA25.
SMRiB7JA25. Positions 3-115.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG4451.
HOGENOMiHOG000141332.
KOiK01602.
OMAiWNPAIEH.
OrthoDBiEOG6G20PM.

Family and domain databases

Gene3Di3.30.190.10. 1 hit.
InterProiIPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamiPF00101. RuBisCO_small. 1 hit.
[Graphical view]
SMARTiSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMiSSF55239. SSF55239. 1 hit.

Sequencei

Sequence statusi: Complete.

B7JA25-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSEVQDYKSR LSDPASRKFE TLSYLPALTA EQIRQQVAYI VSKGWNPAVE
60 70 80 90 100
HTEPENAFGN YWYMWKLPMF GETDVDTILK EAEACHKANP HNHVRIVGYD
110
NFKQSQGTSL VVYRGKTV
Length:118
Mass (Da):13,555
Last modified:February 10, 2009 - v1
Checksum:iFC081121601331EB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001219 Genomic DNA. Translation: ACK79774.1.
RefSeqiWP_009566929.1. NC_011761.1.

Genome annotation databases

EnsemblBacteriaiACK79774; ACK79774; AFE_3052.
KEGGiafr:AFE_3052.
PATRICi20657065. VBIAciFer29821_2781.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001219 Genomic DNA. Translation: ACK79774.1.
RefSeqiWP_009566929.1. NC_011761.1.

3D structure databases

ProteinModelPortaliB7JA25.
SMRiB7JA25. Positions 3-115.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi243159.AFE_3052.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACK79774; ACK79774; AFE_3052.
KEGGiafr:AFE_3052.
PATRICi20657065. VBIAciFer29821_2781.

Phylogenomic databases

eggNOGiCOG4451.
HOGENOMiHOG000141332.
KOiK01602.
OMAiWNPAIEH.
OrthoDBiEOG6G20PM.

Enzyme and pathway databases

BioCyciAFER243159:GH3S-3047-MONOMER.

Family and domain databases

Gene3Di3.30.190.10. 1 hit.
InterProiIPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamiPF00101. RuBisCO_small. 1 hit.
[Graphical view]
SMARTiSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMiSSF55239. SSF55239. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Acidithiobacillus ferrooxidans metabolism: from genome sequence to industrial applications."
    Valdes J., Pedroso I., Quatrini R., Dodson R.J., Tettelin H., Blake R. II, Eisen J.A., Holmes D.S.
    BMC Genomics 9:597-597(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 23270 / DSM 14882 / CIP 104768 / NCIMB 8455Imported.

Entry informationi

Entry nameiB7JA25_ACIF2
AccessioniPrimary (citable) accession number: B7JA25
Entry historyi
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: July 22, 2015
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.