B7IUR4 (B7IUR4_BACC2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
RNA polymerase sigma factor RuleBase RU000715

Gene names

Name:	sigE EMBL ACK96403.1
Ordered Locus Names:	BCG9842_B1236 EMBL ACK96403.1

Organism

Bacillus cereus (strain G9842) [Complete proteome] [HAMAP] EMBL ACK96403.1

Taxonomic identifier

405531 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Bacillus › Bacillus cereus group › Bacillus cereus

Protein attributes

Sequence length	239 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released By similarity. RuleBase RU000715
Sequence similarities	Belongs to the sigma-70 factor family. RuleBase RU000715

Ontologies

Keywords
Biological process	Transcription Transcription regulation
Ligand	DNA-binding SAAS SAAS007627 RuleBase RU000715
Molecular function	Sigma factor SAAS SAAS007627 RuleBase RU000715
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA-dependent transcription, initiation Inferred from electronic annotation. Source: InterPro sporulation resulting in formation of a cellular spore Inferred from electronic annotation. Source: InterPro
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro sigma factor activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B7IUR4 [UniParc]. Last modified February 10, 2009. Version 1. Checksum: FF552F918F933F24	FASTA	239	27,636
	10 20 30 40 50 60 MMKLKFYLVY LWYKVLLKLG IKTDEIYYIG GSEALPPPLT KEEEEVLLNK LPKGDQAARS 70 80 90 100 110 120 LLIERNLRLV VYIARKFENT GINIEDLISI GTIGLIKAVN TFNPEKKIKL ATYASRCIEN 130 140 150 160 170 180 EILMHLRRNN KNRSEVSFDE PLNIDWDGNE LLLSDVLGTD DDIITKDLEA TVDRHLLMKA 190 200 210 220 230 LHQLNDREKQ IMELRFGLAG GEEKTQKDVA DMLGISQSYI SRLEKRIIKR LRKEFNKMV

References

[1]	"Genome sequence of Bacillus cereus G9842." Dodson R.J., Durkin A.S., Rosovitz M.J., Rasko D.A., Hoffmaster A., Ravel J., Sutton G. Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: G9842 EMBL ACK96403.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001186 Genomic DNA. Translation: ACK96403.1.
RefSeq	YP_002447469.1. NC_011772.1.
3D structure databases
ProteinModelPortal	B7IUR4.
ModBase	Search...
Protein-protein interaction databases
STRING	405531.BCG9842_B1236.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACK96403; ACK96403; BCG9842_B1236.
GeneID	7185788.
KEGG	bcg:BCG9842_B1236.
PATRIC	18903538. VBIBacCer50903_3921.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1191.
HOGENOM	HOG000270274.
KO	K03091.
OMA	LIMELRF.
ProtClustDB	PRK08301.
Enzyme and pathway databases
BioCyc	BCER405531:GI5L-3811-MONOMER.
Family and domain databases
Gene3D	1.10.10.10. 1 hit.
InterPro	IPR014284. RNA_pol_sigma-70_dom. IPR014200. RNA_pol_sigma-E. IPR016263. RNA_pol_sigma-SigE/K. IPR000943. RNA_pol_sigma70. IPR007627. RNA_pol_sigma70_r2. IPR007630. RNA_pol_sigma70_r4. IPR013325. RNA_pol_sigma_r2. IPR013324. RNA_pol_sigma_r3_r4. IPR011991. WHTH_DNA-bd_dom. [Graphical view]
Pfam	PF04542. Sigma70_r2. 1 hit. PF04545. Sigma70_r4. 1 hit. [Graphical view]
PIRSF	PIRSF000770. RNA_pol_sigma-SigE/K. 1 hit.
PRINTS	PR00046. SIGMA70FCT.
SUPFAM	SSF88946. Sigma_r2. 1 hit. SSF88659. Sigma_r3_r4. 1 hit.
TIGRFAMs	TIGR02937. sigma70-ECF. 1 hit. TIGR02835. spore_sigmaE. 1 hit.
PROSITE	PS00715. SIGMA70_1. 1 hit. PS00716. SIGMA70_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B7IUR4_BACC2

Accession

Primary (citable) accession number: B7IUR4

Entry history

Integrated into UniProtKB/TrEMBL:	February 10, 2009
Last sequence update:	February 10, 2009
Last modified:	May 1, 2013
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)