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B7ICM4 (B7ICM4_THEAB) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608
Gene names
Ordered Locus Names:THA_1306 EMBL ACJ75751.1
OrganismThermosipho africanus (strain TCF52B) [Complete proteome] [HAMAP] EMBL ACJ75751.1
Taxonomic identifier484019 [NCBI]
Taxonomic lineageBacteria › Thermotogae › Thermotogales › Thermotogaceae › Thermosipho ›

Protein attributes

Sequence length364 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
   LigandPyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
   Molecular functionIsomerase SAAS SAAS020622 RuleBase RU000608
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processD-alanine biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Molecular_functionalanine racemase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B7ICM4 [UniParc].

Last modified February 10, 2009. Version 1.
Checksum: 6C17BA6F3E725F2C

FASTA36440,923
        10         20         30         40         50         60 
MGTESRRTFA EININNYIEN LKYFQKKCSP AKVMPVIKAN AYGHGAVMLA KSAEKMGIDY 

        70         80         90        100        110        120 
FAVAFLEEAL ILRKNGINTN ILVFNYLDKD FVPLAADNNI TITIISNEQV EEYKDLIKKP 

       130        140        150        160        170        180 
KVHINIDTGM NRVGIEPKDA MKIYEKLISN GFEVEGIYTH FAVADSLKKE DIEFTKKQYE 

       190        200        210        220        230        240 
KFLEVNLPVK IRHTNNSAAS LSGIISCGDY VRIGIASYGL MPSNQVKDEN LKPVLTWKSV 

       250        260        270        280        290        300 
VSHVKTLKKG ESVSYGRTFV APYDMKVATI PVGYADGYWR HLSNNGEVLI NGKRRKILGR 

       310        320        330        340        350        360 
VCMDQFVVEA DDEVKIGDEV ILIGKQGNEF ISAEEIADKV GTINYEVTCR ISERVPRIYK 


GVEL

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References

[1]"The genome of Thermosipho africanus TCF52B: lateral genetic connections to the Firmicutes and Archaea."
Nesbo C.L., Bapteste E., Curtis B., Dahle H., Lopez P., Macleod D., Dlutek M., Bowman S., Zhaxybayeva O., Birkeland N.K., Doolittle W.F.
J. Bacteriol. 191:1974-1978(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: TCF52B EMBL ACJ75751.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001185 Genomic DNA. Translation: ACJ75751.1.
RefSeqYP_002335092.1. NC_011653.1.

3D structure databases

ProteinModelPortalB7ICM4.
ModBaseSearch...

Protein-protein interaction databases

STRING484019.THA_1306.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACJ75751; ACJ75751; THA_1306.
GeneID7071972.
KEGGtaf:THA_1306.
PATRIC23919629. VBITheAfr129358_1318.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0787.
HOGENOMHOG000031444.
KOK01775.
OMAWARPGIL.
ProtClustDBCLSK975944.

Enzyme and pathway databases

UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB7ICM4_THEAB
AccessionPrimary (citable) accession number: B7ICM4
Entry history
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: May 1, 2013
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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