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Reviewed, UniProtKB/Swiss-Prot B7HD62 (SYM_BACC4)

Last modified July 28, 2009. Version 7. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Methionyl-tRNA synthetase
    EC=6.1.1.10
Alternative name(s):
    Methionine--tRNA ligase
      Short name=MetRS
Gene names
Name: metG
Ordered Locus Names: BCB4264_A5183
OrganismBacillus cereus (strain B4264) [Complete proteome] [HAMAP]
Taxonomic identifier405532 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacillalesBacillaceaeBacillusBacillus cereus group

Protein attributes

Sequence length544 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

General annotation (Comments)

Function

Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation By similarity.

Catalytic activity

ATP + L-methionine + tRNA(Met) = AMP + diphosphate + L-methionyl-tRNA(Met). HAMAP MF_00098

Cofactor

Binds 1 zinc ion per subunit By similarity.

Subunit structure

Monomer By similarity.

Subcellular location

Cytoplasm By similarity.

Sequence similarities

Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 1 subfamily.

Ontologies

Keywords
   Biological processProtein biosynthesis
   Cellular componentCytoplasm
   LigandATP-binding
Metal-binding
Nucleotide-binding
Zinc
   Molecular functionAminoacyl-tRNA synthetase
Ligase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processmethionyl-tRNA aminoacylation

Inferred from electronic annotation. Source: HAMAP

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionATP binding

Inferred from electronic annotation. Source: HAMAP

methionine-tRNA ligase activity

Inferred from electronic annotation. Source: HAMAP

zinc ion binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 544544Methionyl-tRNA synthetase HAMAP MF_00098
PRO_1000199275

Regions

Motif10 – 2011"HIGH" region HAMAP MF_00098
Motif329 – 3335"KMSKS" region HAMAP MF_00098

Sites

Metal binding1411Zinc By similarity
Metal binding1441Zinc By similarity
Metal binding1531Zinc By similarity
Metal binding1561Zinc By similarity
Binding site3321ATP By similarity

Sequences

Sequence LengthMass (Da)Tools
B7HD62-1 [UniParc].

Last modified February 10, 2009. Version 1.
Checksum: 3A15A00F56933052

FASTA54462,754
        10         20         30         40         50         60 
MSIFIGGAWP YANGSLHLGH IASLLPGDIL ARYYRAKGEN VLYVSGSDCN GTPIAIRAKQ 

        70         80         90        100        110        120 
EGVTAKEIAN KYHEEFQRCF RDLGFTYDCY TRTDSEHHHE TVQKVFLRLL EEGYIYKKTV 

       130        140        150        160        170        180 
EQAYCETCTQ FLPDRYVEGI CPYCHEAARG DQCDACSAIL DPLDLLEKKC KLCGSTPSVE 

       190        200        210        220        230        240 
ETEHFYFALH TFQEQIKKVV EIVKEKGTWR DNAIQLTERY VKEGLQDRAV SRDLPIGVSI 

       250        260        270        280        290        300 
PVKGYEDKKI YVWIEAVAGY YSASKHWAEE TGKDDQEFWN SDAQTYYVHG KDNIPFHSVI 

       310        320        330        340        350        360 
WPAVLLGIGE EAIPRHIVSN EYLTVEKRKL STSKNWAVWV PDILERYDPD SIRYFLTVNA 

       370        380        390        400        410        420 
PENRDTDFSW REFIYSHNSE LLGAYGNFVN RTLKFIEKYY GGIVPKGSIE VELKDKVEGL 

       430        440        450        460        470        480 
YKHVGEAIEQ TKFKVALETI FDAVRFANKY FDEKQPWKQR EDDPVSCEET IYNCVYLIAN 

       490        500        510        520        530        540 
FANLLEPFLP FSSERVRSTL SIIKRNWEPQ NTLPSRIDSV QPLFERIDVK QIEHEVGKLY 


GAVK 

« Hide

References

[1]"Genome sequence of Bacillus cereus B4264."
Dodson R.J., Durkin A.S., Rosovitz M.J., Rasko D.A., Hoffmaster A., Ravel J., Sutton G.
Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

CP001176 Genomic DNA. Translation: ACK59077.1.
RefSeqYP_002369842.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID7098094.
GenomeReviewsGene locus BCB4264_A5183 in contig CP001176_GR.
KEGGbcb:BCB4264_A5183.

Organism-specific databases

CMRSearch...

Family and domain databases

HAMAPMF_00098.
[Tree]
InterProIPR015413. aa-tRNA-synt_I.
IPR001412. aa-tRNA-synth_I_CS.
IPR002304. Met-tRNA-synth_Ia.
IPR014729. Rossmann-like_a/b/a_fold.
IPR014758. tRNA-synt_met_N.
[Graphical view]
Gene3DG3DSA:3.40.50.620. Rossmann-like_a/b/a_fold. 1 hit.
PfamPF09334. tRNA-synt_1g. 1 hit.
[Graphical view]
PRINTSPR01041. TRNASYNTHMET.
TIGRFAMsTIGR00398. metG. 1 hit.
PROSITEPS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSYM_BACC4
AccessionPrimary (citable) accession number: B7HD62
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: February 10, 2009
Last modified: July 28, 2009
This is version 7 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

Aminoacyl-tRNA synthetases

List of aminoacyl-tRNA synthetase entries

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents