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Protein
Submitted name:

Glycosyl hydrolase, BNR repeat-containing protein

Gene

Blon_0646

Organism
Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. exo-alpha-sialidase activity Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciBLON391904:GCDR-667-MONOMER.

Protein family/group databases

CAZyiGH33. Glycoside Hydrolase Family 33.

Names & Taxonomyi

Protein namesi
Submitted name:
Glycosyl hydrolase, BNR repeat-containing proteinImported
Gene namesi
Ordered Locus Names:Blon_0646Imported
OrganismiBifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12)Imported
Taxonomic identifieri391904 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium
ProteomesiUP000001360 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi391904.Blon_0646.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG4409.
KOiK01186.
OrthoDBiEOG61CM2G.

Family and domain databases

Gene3Di2.120.10.10. 2 hits.
2.60.120.200. 1 hit.
InterProiIPR013320. ConA-like_dom.
IPR001791. Laminin_G.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PfamiPF02210. Laminin_G_2. 1 hit.
[Graphical view]
SUPFAMiSSF49899. SSF49899. 2 hits.
SSF50939. SSF50939. 2 hits.

Sequencei

Sequence statusi: Complete.

B7GPM3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAASNPISWS QRTFPSPEGT IACRFRAHAD GRIFDAVNGS ANDAPLLICA
60 70 80 90 100
IEHDALRVRA TTPRQHVDFD IEDTTGIADG AMHTFALTFG EFGTRVYLDG
110 120 130 140 150
SQCFSGTANL CPTTLTGTEG SGQGAIRLAG PSIDVTDMRL HAIPLTSESI
160 170 180 190 200
AALTPRPAPD IDFAAAQLAP RDVRRVRTLR SGTIFMHFRV RGPRQYGTLL
210 220 230 240 250
AAGERGEERL AVSIDDNGIT MTAADGLYEP STYHARGAWD DGRWHDLSIR
260 270 280 290 300
SARGAIDMYV DGWHELHQAG QVFFGDWPQL DEVAIGQNTE GVRLMGEVRN
310 320 330 340 350
GGVFTTPLTD GAIRRLSDAP ALTTTALFDK GYHGSVSYRI PSIIRTPHGV
360 370 380 390 400
VVAGADQRTA IANDAPNHIN FVMRRSLDGG RTWLDMQTVI ANPGEGVDGA
410 420 430 440 450
CTIDSCLVCD ERNGRLTVLI DRFAGGVGLP NNTPGTGVDR HGRPCLYDRA
460 470 480 490 500
GTRYVLADDG TVLDGGGERT GYRVDAHGNV THEGRASGNI YLKEGADPDE
510 520 530 540 550
SLLIERTSFI IELHSDDDGE TWSTPRNINH MIKEDWMHFL GVSPGNGIQL
560 570 580 590 600
QASEHRGRLL VPFYCTGASL KHYSGGALIS DDGGDTWRRG SMINDGRIVN
610 620 630 640 650
GTAVDPKNIR DDDATTHESV FVERADGTVV CFFRNQNHAG RIGVALSHDG
660 670 680 690 700
GETWDDLYFD KDVPDIFCQP NAVACAPRSD TMVFANASQM LPYRGNGVLR
710 720 730 740 750
LSLDGARTWA AHRCINPYHY GYQCMTMLPD GELGLLWERE TAGLYFTTLP
760
LSVFGAAETH
Length:760
Mass (Da):82,562
Last modified:February 9, 2009 - v1
Checksum:i605F0A1CC4806313
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001095 Genomic DNA. Translation: ACJ51753.1.
RefSeqiWP_012577044.1. NC_011593.1.
YP_002322131.1. NC_011593.1.

Genome annotation databases

EnsemblBacteriaiACJ51753; ACJ51753; Blon_0646.
GeneIDi7053156.
KEGGibln:Blon_0646.
PATRICi21122212. VBIBifLon71229_0632.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001095 Genomic DNA. Translation: ACJ51753.1.
RefSeqiWP_012577044.1. NC_011593.1.
YP_002322131.1. NC_011593.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi391904.Blon_0646.

Protein family/group databases

CAZyiGH33. Glycoside Hydrolase Family 33.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACJ51753; ACJ51753; Blon_0646.
GeneIDi7053156.
KEGGibln:Blon_0646.
PATRICi21122212. VBIBifLon71229_0632.

Phylogenomic databases

eggNOGiCOG4409.
KOiK01186.
OrthoDBiEOG61CM2G.

Enzyme and pathway databases

BioCyciBLON391904:GCDR-667-MONOMER.

Family and domain databases

Gene3Di2.120.10.10. 2 hits.
2.60.120.200. 1 hit.
InterProiIPR013320. ConA-like_dom.
IPR001791. Laminin_G.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PfamiPF02210. Laminin_G_2. 1 hit.
[Graphical view]
SUPFAMiSSF49899. SSF49899. 2 hits.
SSF50939. SSF50939. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Bifidobacterium longum subsp. infantis reveals adaptations for milk utilization within the infant microbiome."
    Sela D.A., Chapman J., Adeuya A., Kim J.H., Chen F., Whitehead T.R., Lapidus A., Rokhsar D.S., Lebrilla C.B., German J.B., Price N.P., Richardson P.M., Mills D.A.
    Proc. Natl. Acad. Sci. U.S.A. 105:18964-18969(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12 [JGI]Imported.

Entry informationi

Entry nameiB7GPM3_BIFLS
AccessioniPrimary (citable) accession number: B7GPM3
Entry historyi
Integrated into UniProtKB/TrEMBL: February 9, 2009
Last sequence update: February 9, 2009
Last modified: March 31, 2015
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.