Skip Header

Contribute Send feedback
Read comments (?) or add your own

B7GPM3 (B7GPM3_BIFLS) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Protein attributes

Sequence length760 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL ACJ51753.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionexo-alpha-sialidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B7GPM3 [UniParc].

Last modified February 10, 2009. Version 1.
Checksum: 605F0A1CC4806313

FASTA76082,562
        10         20         30         40         50         60 
MAASNPISWS QRTFPSPEGT IACRFRAHAD GRIFDAVNGS ANDAPLLICA IEHDALRVRA 

        70         80         90        100        110        120 
TTPRQHVDFD IEDTTGIADG AMHTFALTFG EFGTRVYLDG SQCFSGTANL CPTTLTGTEG 

       130        140        150        160        170        180 
SGQGAIRLAG PSIDVTDMRL HAIPLTSESI AALTPRPAPD IDFAAAQLAP RDVRRVRTLR 

       190        200        210        220        230        240 
SGTIFMHFRV RGPRQYGTLL AAGERGEERL AVSIDDNGIT MTAADGLYEP STYHARGAWD 

       250        260        270        280        290        300 
DGRWHDLSIR SARGAIDMYV DGWHELHQAG QVFFGDWPQL DEVAIGQNTE GVRLMGEVRN 

       310        320        330        340        350        360 
GGVFTTPLTD GAIRRLSDAP ALTTTALFDK GYHGSVSYRI PSIIRTPHGV VVAGADQRTA 

       370        380        390        400        410        420 
IANDAPNHIN FVMRRSLDGG RTWLDMQTVI ANPGEGVDGA CTIDSCLVCD ERNGRLTVLI 

       430        440        450        460        470        480 
DRFAGGVGLP NNTPGTGVDR HGRPCLYDRA GTRYVLADDG TVLDGGGERT GYRVDAHGNV 

       490        500        510        520        530        540 
THEGRASGNI YLKEGADPDE SLLIERTSFI IELHSDDDGE TWSTPRNINH MIKEDWMHFL 

       550        560        570        580        590        600 
GVSPGNGIQL QASEHRGRLL VPFYCTGASL KHYSGGALIS DDGGDTWRRG SMINDGRIVN 

       610        620        630        640        650        660 
GTAVDPKNIR DDDATTHESV FVERADGTVV CFFRNQNHAG RIGVALSHDG GETWDDLYFD 

       670        680        690        700        710        720 
KDVPDIFCQP NAVACAPRSD TMVFANASQM LPYRGNGVLR LSLDGARTWA AHRCINPYHY 

       730        740        750        760 
GYQCMTMLPD GELGLLWERE TAGLYFTTLP LSVFGAAETH

« Hide

References

[1]"The genome sequence of Bifidobacterium longum subsp. infantis reveals adaptations for milk utilization within the infant microbiome."
Sela D.A., Chapman J., Adeuya A., Kim J.H., Chen F., Whitehead T.R., Lapidus A., Rokhsar D.S., Lebrilla C.B., German J.B., Price N.P., Richardson P.M., Mills D.A.
Proc. Natl. Acad. Sci. U.S.A. 105:18964-18969(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12 [JGI].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001095 Genomic DNA. Translation: ACJ51753.1.
RefSeqYP_002322131.1. NC_011593.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING391904.Blon_0646.

Protein family/group databases

CAZyGH33. Glycoside Hydrolase Family 33.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACJ51753; ACJ51753; Blon_0646.
GeneID7053156.
KEGGbln:Blon_0646.
PATRIC21122212. VBIBifLon71229_0632.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4409.
KOK01186.
ProtClustDBCLSK231796.

Family and domain databases

Gene3D2.120.10.10. 2 hits.
2.60.120.200. 1 hit.
InterProIPR008985. ConA-like_lec_gl_sf.
IPR013320. ConA-like_subgrp.
IPR001791. Laminin_G.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERPTHR10628. PTHR10628. 1 hit.
PfamPF02210. Laminin_G_2. 1 hit.
[Graphical view]
SUPFAMSSF49899. ConA_like_lec_gl. 1 hit.
SSF50939. Sialidase. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB7GPM3_BIFLS
AccessionPrimary (citable) accession number: B7GPM3
Entry history
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: May 1, 2013
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info