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B7GNQ0 (B7GNQ0_BIFLS) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length394 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
B7GNQ0 [UniParc].

Last modified February 10, 2009. Version 1.
Checksum: 89467F072A925DE5

FASTA39441,978
        10         20         30         40         50         60 
MTENGMMNTN NTVCGANHDG AMSLAAPGDY GVACYRIPAL AEAPNGWILA AFDARPHNCQ 

        70         80         90        100        110        120 
DAPQANSIVQ RISKDGGRSF EPQHVVAAGH DGVDKYGYSD PSYVVDRQTG EVFLFFVKSY 

       130        140        150        160        170        180 
DAGFGTSQAG VDPSAREVLQ AAVTSSIDNG VTWSEPRIIT ADITNSESWI SRFASSGAGI 

       190        200        210        220        230        240 
QLTYGEHAGR LIQQYTIKEL DGRYRAVSVF SDDHGATWHA GTPVGDHMDE NKVVELSDGR 

       250        260        270        280        290        300 
VMLNSRSSDG NGCRYVAISR DGGATYGPVI RETQLPDPEN NAQIARAFPD APEGSAQAKV 

       310        320        330        340        350        360 
LLYSSSSPSD RIDGLVRVSI DDGKTWSAGR RFTTGPMAYS VIAALSHKAG GGYGLLYEGD 

       370        380        390 
NNNIMYTRIS LDWLNGQLNV DGIGGFPLSG EGGC 

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References

[1]"The genome sequence of Bifidobacterium longum subsp. infantis reveals adaptations for milk utilization within the infant microbiome."
Sela D.A., Chapman J., Adeuya A., Kim J.H., Chen F., Whitehead T.R., Lapidus A., Rokhsar D.S., Lebrilla C.B., German J.B., Price N.P., Richardson P.M., Mills D.A.
Proc. Natl. Acad. Sci. U.S.A. 105:18964-18969(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 15697 EMBL ACJ53406.1 and ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12 [JGI].
[2]"Bifidobacteria can protect from enteropathogenic infection through production of acetate."
Fukuda S., Toh H., Hase K., Oshima K., Nakanishi Y., Yoshimura K., Tobe T., Clarke J.M., Topping D.L., Suzuki T., Taylor T.D., Itoh K., Kikuchi J., Morita H., Hattori M., Ohno H.
Nature 469:543-547(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12 [Tokyo] and JCM 1222.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001095 Genomic DNA. Translation: ACJ53406.1.
AP010889 Genomic DNA. Translation: BAJ69999.1.
RefSeqYP_002323784.1. NC_011593.1.
YP_005586169.1. NC_017219.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING391904.Blon_2348.

Protein family/group databases

CAZyGH33. Glycoside Hydrolase Family 33.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACJ53406; ACJ53406; Blon_2348.
BAJ69999; BAJ69999; BLIJ_2422.
GeneID12166744.
7054948.
KEGGbln:Blon_2348.
blon:BLIJ_2422.
PATRIC21125793. VBIBifLon71229_2362.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4409.
KOK01186.
OMAFATSEVG.
OrthoDBEOG64JFJ7.
ProtClustDBCLSK2545356.

Enzyme and pathway databases

BioCycBLON391904:GCDR-2430-MONOMER.

Family and domain databases

Gene3D2.120.10.10. 1 hit.
InterProIPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERPTHR10628. PTHR10628. 1 hit.
SUPFAMSSF50939. SSF50939. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB7GNQ0_BIFLS
AccessionPrimary (citable) accession number: B7GNQ0
Secondary accession number(s): E8MNY3
Entry history
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: November 13, 2013
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)