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B7GMS2 (B7GMS2_ANOFW) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Spermidine/putrescine import ATP-binding protein PotA HAMAP-Rule MF_01726

EC=3.6.3.31 HAMAP-Rule MF_01726
Gene names
Name:msmX EMBL ACJ35174.1
Synonyms:potA HAMAP-Rule MF_01726
Ordered Locus Names:Aflv_2821 EMBL ACJ35174.1
OrganismAnoxybacillus flavithermus (strain DSM 21510 / WK1) [Complete proteome] [HAMAP] EMBL ACJ35174.1
Taxonomic identifier491915 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeAnoxybacillus

Protein attributes

Sequence length330 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system By similarity. HAMAP-Rule MF_01726 SAAS SAAS005893

Catalytic activity

ATP + H2O + polyamine(Out) = ADP + phosphate + polyamine(In). HAMAP-Rule MF_01726 SAAS SAAS005893

Subunit structure

The complex is composed of two ATP-binding proteins (PotA), two transmembrane proteins (PotB and PotC) and a solute-binding protein (PotD) By similarity. HAMAP-Rule MF_01726 SAAS SAAS005893

Subcellular location

Cell membrane; Peripheral membrane protein By similarity HAMAP-Rule MF_01726.

Sequence similarities

Belongs to the ABC transporter superfamily. RuleBase RU000684

Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. [View classification] HAMAP-Rule MF_01726

Contains 1 ABC transporter domain. HAMAP-Rule MF_01726

Contains ABC transporter domain. SAAS SAAS005893

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Domain1 – 217217ABC transporter By similarity HAMAP-Rule MF_01726
Nucleotide binding19 – 268ATP By similarity HAMAP-Rule MF_01726

Sequences

Sequence LengthMass (Da)Tools
B7GMS2 [UniParc].

Last modified February 10, 2009. Version 1.
Checksum: 82FEDC9270FE1EB3

FASTA33037,852
        10         20         30         40         50         60 
MLDDVSFDIE RGKFYTLLGP SGCGKTTILR LIAGFIEPTK GDIYFHGQRI NHVPSNKRRV 

        70         80         90        100        110        120 
NTVFQDYALF PHLNVFENVA FGLRIKKIPE ADIERKVKEA LRFVNLEGYE QRAIHEMSGG 

       130        140        150        160        170        180 
QRQRVAIARA IVNEPDVLLL DEPLSALDLK LRTEMQYELR ELQRRLGITF IFVTHDQEEA 

       190        200        210        220        230        240 
LAMSDEIFVL NKGKIEQRGT PKDIYDEPVN RFVADFIGES NIITGMMIDD FVVEFANQQF 

       250        260        270        280        290        300 
TCVDRGFAKN ERVDIVIRPE DLELTTVERG KLLVRVDSVL FRGVHYELCC YDAYGNEWLV 

       310        320        330 
HSTKKAEIGE EIGLHFEPEA IHVMKRSGGE 

« Hide

References

[1]"Encapsulated in silica: genome, proteome and physiology of the thermophilic bacterium Anoxybacillus flavithermus WK1."
Saw J.H., Mountain B.W., Feng L., Omelchenko M.V., Hou S., Saito J.A., Stott M.B., Li D., Zhao G., Wu J., Galperin M.Y., Koonin E.V., Makarova K.S., Wolf Y.I., Rigden D.J., Dunfield P.F., Wang L., Alam M.
Genome Biol. 9:R161-R161(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 21510 / WK1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000922 Genomic DNA. Translation: ACJ35174.1.
RefSeqYP_002317159.1. NC_011567.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING491915.Aflv_2821.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACJ35174; ACJ35174; Aflv_2821.
GeneID7039094.
KEGGafl:Aflv_2821.
PATRIC20957632. VBIAnoFla45531_2901.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3842.
KOK11072.
OMAYDEPVND.
OrthoDBEOG6T7N3V.

Enzyme and pathway databases

BioCycAFLA491915:GHEO-2910-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
InterProIPR003593. AAA+_ATPase.
IPR017879. ABC_Sperm/Put_ATP-bd_PotA.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR008995. Mo/tungstate-bd_C_term_dom.
IPR027417. P-loop_NTPase.
IPR005893. Sp_pt_ABC_ATP-bd.
IPR013611. Transp-assoc_OB_typ2.
[Graphical view]
PfamPF00005. ABC_tran. 1 hit.
PF08402. TOBE_2. 1 hit.
[Graphical view]
SMARTSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMSSF50331. SSF50331. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR01187. potA. 1 hit.
PROSITEPS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
PS51305. POTA. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB7GMS2_ANOFW
AccessionPrimary (citable) accession number: B7GMS2
Entry history
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: July 9, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)