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Protein
Submitted name:

DNA topoisomerase

Gene

topB

Organism
Anoxybacillus flavithermus (strain DSM 21510 / WK1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

IsomeraseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA topoisomeraseImported
Gene namesi
Name:topBImported
Ordered Locus Names:Aflv_1541Imported
OrganismiAnoxybacillus flavithermus (strain DSM 21510 / WK1)Imported
Taxonomic identifieri491915 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeAnoxybacillus
Proteomesi
  • UP000000742 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi491915.Aflv_1541.

Structurei

3D structure databases

ProteinModelPortaliB7GJP4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 140ToprimInterPro annotationAdd BLAST140

Phylogenomic databases

eggNOGiENOG4108IYH. Bacteria.
COG0550. LUCA.
HOGENOMiHOG000086847.
KOiK03169.
OMAiMSRACAD.
OrthoDBiPOG091H028X.

Family and domain databases

CDDicd00186. TOP1Ac. 1 hit.
Gene3Di1.10.290.10. 1 hit.
1.10.460.10. 2 hits.
3.40.50.140. 1 hit.
InterProiIPR000380. Topo_IA.
IPR003601. Topo_IA_2.
IPR023406. Topo_IA_AS.
IPR013497. Topo_IA_cen.
IPR013824. Topo_IA_cen_sub1.
IPR013826. Topo_IA_cen_sub3.
IPR023405. Topo_IA_core_domain.
IPR003602. Topo_IA_DNA-bd_dom.
IPR005738. TopoIII.
IPR025589. Toprim_C_rpt.
IPR006171. Toprim_domain.
[Graphical view]
PANTHERiPTHR11390. PTHR11390. 2 hits.
PfamiPF01131. Topoisom_bac. 1 hit.
PF01751. Toprim. 1 hit.
PF13342. Toprim_Crpt. 1 hit.
[Graphical view]
PRINTSiPR00417. PRTPISMRASEI.
SMARTiSM00437. TOP1Ac. 1 hit.
SM00436. TOP1Bc. 1 hit.
SM00493. TOPRIM. 1 hit.
[Graphical view]
SUPFAMiSSF56712. SSF56712. 1 hit.
TIGRFAMsiTIGR01056. topB. 1 hit.
PROSITEiPS00396. TOPOISOMERASE_I_PROK. 1 hit.
PS50880. TOPRIM. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B7GJP4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKVIIAEKPD QGKTLASIFQ TKKREGYIEI LPNEMFPKGA YMTWAVGHLF
60 70 80 90 100
ELASPETYEA SWKRWTLDTL PIIPDRFQYE IDRKKAKQFA IIKQLLRKPE
110 120 130 140 150
VVEIIHAGDA GREGELIIRN IIYMSGVKKP IKRLWISSLT PKAIEQGFRQ
160 170 180 190 200
LLDEKQTRPL YEEAYARTCA DWLVGINASR VYTILLKQKG MNDVFSVGRV
210 220 230 240 250
QTPTLALIVR REKEIEQFHP KPFWEVVATF DVDGKRYEGK WWHENETRTY
260 270 280 290 300
DRELAEKVSA FCRRKQVEVA EVVCERKTFL PPLLFNLSTL QATANKRFKY
310 320 330 340 350
SPQKTLDILQ KLYQKGYVSY PRSDSQYVTK GEAETFPHIL KQLSQKEEYA
360 370 380 390 400
PYFPLVHESI LHNKRYVNEK KVTDHYAIIP TEQVPNLTKL SQDERNIYDL
410 420 430 440 450
IVRRLIAAHS EEAIFDYTTI VTVVDGRARF ISKGKKQIQA GWRDVLMSQD
460 470 480 490 500
DDVQLLPNVQ SGEKGTVYDV YVKEGKTQPP KRYTEGELIT LMKTAGKFLD
510 520 530 540 550
DEQLEKVLAK TEGLGTEATR ASIITTLKQR NYIEIKNNQV YVTDKGKVLI
560 570 580 590 600
DAIGPHLLAS PEMTAKWEQR LSEIGEEKAS ATAFMEQVKK LAAKIVADAV
610 620 630 640 650
QVANDWSFEG LDTASIQRKK KTTIGKHVGV CKLCGGSVID KGSFYGCVNY
660 670 680 690 700
TKTKCSFTIS KTILGKSISQ ANVKKLLAEG KTNVIKGFKK GENTFNAAVI
710
WDETEKRISF SFEK
Length:714
Mass (Da):81,604
Last modified:February 10, 2009 - v1
Checksum:i0104508F14EF3ED2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000922 Genomic DNA. Translation: ACJ33907.1.
RefSeqiWP_012575131.1. NC_011567.1.

Genome annotation databases

EnsemblBacteriaiACJ33907; ACJ33907; Aflv_1541.
GeneIDi7037796.
KEGGiafl:Aflv_1541.
PATRICi20954957. VBIAnoFla45531_1587.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000922 Genomic DNA. Translation: ACJ33907.1.
RefSeqiWP_012575131.1. NC_011567.1.

3D structure databases

ProteinModelPortaliB7GJP4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi491915.Aflv_1541.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACJ33907; ACJ33907; Aflv_1541.
GeneIDi7037796.
KEGGiafl:Aflv_1541.
PATRICi20954957. VBIAnoFla45531_1587.

Phylogenomic databases

eggNOGiENOG4108IYH. Bacteria.
COG0550. LUCA.
HOGENOMiHOG000086847.
KOiK03169.
OMAiMSRACAD.
OrthoDBiPOG091H028X.

Family and domain databases

CDDicd00186. TOP1Ac. 1 hit.
Gene3Di1.10.290.10. 1 hit.
1.10.460.10. 2 hits.
3.40.50.140. 1 hit.
InterProiIPR000380. Topo_IA.
IPR003601. Topo_IA_2.
IPR023406. Topo_IA_AS.
IPR013497. Topo_IA_cen.
IPR013824. Topo_IA_cen_sub1.
IPR013826. Topo_IA_cen_sub3.
IPR023405. Topo_IA_core_domain.
IPR003602. Topo_IA_DNA-bd_dom.
IPR005738. TopoIII.
IPR025589. Toprim_C_rpt.
IPR006171. Toprim_domain.
[Graphical view]
PANTHERiPTHR11390. PTHR11390. 2 hits.
PfamiPF01131. Topoisom_bac. 1 hit.
PF01751. Toprim. 1 hit.
PF13342. Toprim_Crpt. 1 hit.
[Graphical view]
PRINTSiPR00417. PRTPISMRASEI.
SMARTiSM00437. TOP1Ac. 1 hit.
SM00436. TOP1Bc. 1 hit.
SM00493. TOPRIM. 1 hit.
[Graphical view]
SUPFAMiSSF56712. SSF56712. 1 hit.
TIGRFAMsiTIGR01056. topB. 1 hit.
PROSITEiPS00396. TOPOISOMERASE_I_PROK. 1 hit.
PS50880. TOPRIM. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB7GJP4_ANOFW
AccessioniPrimary (citable) accession number: B7GJP4
Entry historyi
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: November 2, 2016
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.