Reviewed, UniProtKB/Swiss-Prot B7GGV9 (ARAB_ANOFW)

Names and origin

Protein names

Recommended name:
    Ribulokinase
    EC=2.7.1.16

Gene names

Name:	araB
Ordered Locus Names:	Aflv_0530

Organism

Anoxybacillus flavithermus (strain DSM 21510 / WK1) [Complete proteome] [HAMAP]

Taxonomic identifier

491915 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Bacillaceae › Anoxybacillus

Protein attributes

Sequence length	564 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Catalytic activity	ATP + L(or D)-ribulose = ADP + L(or D)-ribulose 5-phosphate. HAMAP MF_00520
Pathway	Carbohydrate degradation; L-arabinose degradation via L-ribulose; D-xylulose 5-phosphate from L-arabinose (bacterial route): step 2/3. HAMAP MF_00520
Sequence similarities	Belongs to the ribulokinase family.

Ontologies

Keywords
Biological process	Arabinose catabolism Carbohydrate metabolism
Ligand	ATP-binding Nucleotide-binding
Molecular function	Kinase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	L-arabinose catabolic process Inferred from electronic annotation. Source: HAMAP
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ribulokinase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 564	564	Ribulokinase HAMAP MF_00520		PRO_1000127625

Sequences

	Sequence		Length	Mass (Da)
	B7GGV9-1 [UniParc]. Last modified February 10, 2009. Version 1. Checksum: 10567BE3E7019125	FASTA	564	61,968
	10 20 30 40 50 60 MGKKYVIGID YGTESGRAVL VDLEGNEIAD HVTPYPHGVI DEVLPESNVQ LEPDWALQHP 70 80 90 100 110 120 GDYIEVLATA VPAVLQKSGV NPADVIGVGI DFTACTMLPI AGSGEPLCLK PEFKHRPHSW 130 140 150 160 170 180 VKLWKHHAAQ DEANLLNEMA AKRGEAFLPR YGGKISSEWM IAKIWQILNE DPDIYDQTDL 190 200 210 220 230 240 FLEATDWVIF KMTGQLVRNS CTAGYKSIWH KQDGYPSKEF FRALDPRLEH VTETKLRGSI 250 260 270 280 290 300 VPLGTRAGVL TKEMAAMMGL LPGTAVAVGN VDAHAAVPGV GVVEPGKMVM AMGTSICHML 310 320 330 340 350 360 LGTEEKYVEG MCGVVEDGII PGYFGYEAGQ SAVGDIFAWY VEQSVPAYVK EAAEKEGVSV 370 380 390 400 410 420 HEWLEKRAAA YRPGETGLLA LDWWNGNRSV LVDTDLTGLI IGYTLLTKPE EIYRALLEAT 430 440 450 460 470 480 AFGTRKIIDA FVESGINVDE LYACGGLPQK NKLLMQIYAD VTNREIKIAA SKQTPAVGAA 490 500 510 520 530 540 MFAAVAAGKE NGGYESIIEA ARNMGKVREE TFKPIPENVA IYEQLYQEYT KLHDYFGRGE 550 560 NDVMKRLKHW KETARAVKES ISLS

References

[1]

"Encapsulated in silica: genome, proteome and physiology of the thermophilic bacterium Anoxybacillus flavithermus WK1." Saw J.H., Mountain B.W., Feng L., Omelchenko M.V., Hou S., Saito J.A., Stott M.B., Li D., Zhao G., Wu J., Galperin M.Y., Koonin E.V., Makarova K.S., Wolf Y.I., Rigden D.J., Dunfield P.F., Wang L., Alam M. Genome Biol. 9:RESEARCH161.1-RESEARCH161.16(2008) [PubMed: 19014707] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	CP000922 Genomic DNA. Translation: ACJ32914.1.
RefSeq	YP_002314899.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	7036787.
GenomeReviews	Gene locus Aflv_0530 in contig CP000922_GR.
KEGG	afl:Aflv_0530.
Organism-specific databases
CMR	Search...
Family and domain databases
HAMAP	MF_00520. [Tree]
InterPro	IPR000577. Carb_kinase_FGGY. IPR018485. Carb_kinase_FGGY_C. IPR018484. Carb_kinase_FGGY_N. IPR005929. L_ribulokin. [Graphical view]
PANTHER	PTHR10196. FGGY_kin. 1 hit.
Pfam	PF02782. FGGY_C. 1 hit. PF00370. FGGY_N. 1 hit. [Graphical view]
TIGRFAMs	TIGR01234. L-ribulokinase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

ARAB_ANOFW

Accession

Primary (citable) accession number: B7GGV9

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 14, 2009
Last sequence update:	February 10, 2009
Last modified:	October 13, 2009
This is version 9 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)