B7GDX4 (B7GDX4_PHATC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EEC43202.1

Gene names

ORF Names:

PHATRDRAFT_16875 EMBL EEC43202.1

Organism

Phaeodactylum tricornutum (strain CCAP 1055/1) [Reference proteome]

Taxonomic identifier

556484 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Stramenopiles › Bacillariophyta › Bacillariophyceae › Bacillariophycidae › Naviculales › Phaeodactylaceae › Phaeodactylum › Phaeodactylum tricornutum

Protein attributes

Sequence length	164 AA.
Sequence status	Fragment.
Protein existence	Predicted

General annotation (Comments)

Catalytic activity	S-adenosyl-L-methionine + L-lysine-[histone] = S-adenosyl-L-homocysteine + N(6)-methyl-L-lysine-[histone]. SAAS SAAS001214
Sequence similarities	Contains 1 SET domain. RuleBase RU004538 SAAS SAAS001214 Contains 1 post-SET domain. RuleBase RU004541

Ontologies

Keywords
Cellular component	Nucleus SAAS SAAS003616
Molecular function	Methyltransferase RuleBase RU004541 SAAS SAAS001214 Transferase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	nucleus Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	methyltransferase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL EEC43202.1
	Non-terminal residue	164	1	EMBL EEC43202.1

Sequences

	Sequence		Length	Mass (Da)
	B7GDX4 [UniParc]. Last modified February 10, 2009. Version 1. Checksum: 063114B5E75C7544	FASTA	164	18,594
	10 20 30 40 50 60 CPKTCPGDMF CGNRRITNGE FRTVRVVEAG RKGRGLVVEE DVDVGDMILE YVGRAVPQKQ 70 80 90 100 110 120 LAKYFRRYQH DRRLYIMSLG DGIYIDARSK GGLARYINHS CEPNCQVQRW KVKGVLRAVV 130 140 150 160 VPTRSLSAGT ELTFDYQWER QRGRAATKCY CGTPSCRGTL EVIP

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The Phaeodactylum genome reveals the evolutionary history of diatom genomes." Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A., Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A., Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T. , Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P., Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C., Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D., Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G., La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J., Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A., Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L., Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A., Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R., Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S., Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y., Grigoriev I.V. Nature 456:239-244(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CCAP 1055/1 EMBL EEC43202.1.
[2]	Diatom Consortium Grigoriev I., Grimwood J., Kuo A., Otillar R.P., Salamov A., Detter J.C., Lindquist E., Shapiro H., Lucas S., Glavina del Rio T., Pitluck S., Rokhsar D., Bowler C. Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: CCAP 1055/1 EMBL EEC43202.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000631 Genomic DNA. Translation: EEC43202.1.
RefSeq	XP_002185333.1. XM_002185297.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblProtists	Phatr16875; Phatr16875; Phatr16875.
GeneID	7199195.
KEGG	pti:PHATRDRAFT_16875.
Phylogenomic databases
HOGENOM	HOG000253795.
KO	K11423.
ProtClustDB	CLSN2712643.
Family and domain databases
InterPro	IPR003616. Post-SET_dom. IPR001214. SET_dom. [Graphical view]
Pfam	PF00856. SET. 1 hit. [Graphical view]
SMART	SM00508. PostSET. 1 hit. SM00317. SET. 1 hit. [Graphical view]
PROSITE	PS50868. POST_SET. 1 hit. PS50280. SET. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B7GDX4_PHATC

Accession

Primary (citable) accession number: B7GDX4

Entry history

Integrated into UniProtKB/TrEMBL:	February 10, 2009
Last sequence update:	February 10, 2009
Last modified:	January 9, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)