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B7GDX4

- B7GDX4_PHATC

UniProt

B7GDX4 - B7GDX4_PHATC

Protein
Submitted name:

Predicted protein

Gene

PHATRDRAFT_16875

Organism
Phaeodactylum tricornutum (strain CCAP 1055/1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 27 (01 Oct 2014)
      Sequence version 1 (10 Feb 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    S-adenosyl-L-methionine + L-lysine-[histone] = S-adenosyl-L-homocysteine + N(6)-methyl-L-lysine-[histone].SAAS annotation

    GO - Molecular functioni

    1. methyltransferase activity Source: UniProtKB-KW

    Keywords - Molecular functioni

    MethyltransferaseUniRule annotation, Transferase

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Predicted proteinImported
    Gene namesi
    ORF Names:PHATRDRAFT_16875Imported
    OrganismiPhaeodactylum tricornutum (strain CCAP 1055/1)Imported
    Taxonomic identifieri556484 [NCBI]
    Taxonomic lineageiEukaryotaStramenopilesBacillariophytaBacillariophyceaeBacillariophycidaeNaviculalesPhaeodactylaceaePhaeodactylum
    ProteomesiUP000000759: Unassembled WGS sequence

    Subcellular locationi

    GO - Cellular componenti

    1. nucleus Source: UniProtKB-KW

    Interactioni

    Protein-protein interaction databases

    STRINGi2850.JGI16875.

    Family & Domainsi

    Sequence similaritiesi

    Contains 1 SET domain.UniRule annotation
    Contains SET domain.SAAS annotation

    Phylogenomic databases

    HOGENOMiHOG000253795.
    KOiK11423.

    Family and domain databases

    InterProiIPR003616. Post-SET_dom.
    IPR001214. SET_dom.
    [Graphical view]
    PfamiPF00856. SET. 1 hit.
    [Graphical view]
    SMARTiSM00508. PostSET. 1 hit.
    SM00317. SET. 1 hit.
    [Graphical view]
    PROSITEiPS50868. POST_SET. 1 hit.
    PS50280. SET. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    B7GDX4-1 [UniParc]FASTAAdd to Basket

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    CPKTCPGDMF CGNRRITNGE FRTVRVVEAG RKGRGLVVEE DVDVGDMILE    50
    YVGRAVPQKQ LAKYFRRYQH DRRLYIMSLG DGIYIDARSK GGLARYINHS 100
    CEPNCQVQRW KVKGVLRAVV VPTRSLSAGT ELTFDYQWER QRGRAATKCY 150
    CGTPSCRGTL EVIP 164
    Length:164
    Mass (Da):18,594
    Last modified:February 10, 2009 - v1
    Checksum:i063114B5E75C7544
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported
    Non-terminal residuei164 – 1641Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000631 Genomic DNA. Translation: EEC43202.1.
    RefSeqiXP_002185333.1. XM_002185297.1.

    Genome annotation databases

    EnsemblProtistsiPhatr16875; Phatr16875; Phatr16875.
    GeneIDi7199195.
    KEGGipti:PHATRDRAFT_16875.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000631 Genomic DNA. Translation: EEC43202.1 .
    RefSeqi XP_002185333.1. XM_002185297.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 2850.JGI16875.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi Phatr16875 ; Phatr16875 ; Phatr16875 .
    GeneIDi 7199195.
    KEGGi pti:PHATRDRAFT_16875.

    Phylogenomic databases

    HOGENOMi HOG000253795.
    KOi K11423.

    Family and domain databases

    InterProi IPR003616. Post-SET_dom.
    IPR001214. SET_dom.
    [Graphical view ]
    Pfami PF00856. SET. 1 hit.
    [Graphical view ]
    SMARTi SM00508. PostSET. 1 hit.
    SM00317. SET. 1 hit.
    [Graphical view ]
    PROSITEi PS50868. POST_SET. 1 hit.
    PS50280. SET. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The Phaeodactylum genome reveals the evolutionary history of diatom genomes."
      Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A., Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A., Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T.
      , Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P., Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C., Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D., Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G., La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J., Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A., Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L., Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A., Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R., Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S., Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y., Grigoriev I.V.
      Nature 456:239-244(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CCAP 1055/1Imported.
    2. Cited for: GENOME REANNOTATION.
      Strain: CCAP 1055/1Imported.

    Entry informationi

    Entry nameiB7GDX4_PHATC
    AccessioniPrimary (citable) accession number: B7GDX4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 10, 2009
    Last sequence update: February 10, 2009
    Last modified: October 1, 2014
    This is version 27 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3