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B7FUH0

- B7FUH0_PHATC

UniProt

B7FUH0 - B7FUH0_PHATC

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Protein
Submitted name: Predicted protein
Gene
PHATRDRAFT_34010
Organism
Phaeodactylum tricornutum (strain CCAP 1055/1)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. biosynthetic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Predicted proteinImported
Gene namesi
ORF Names:PHATRDRAFT_34010Imported
OrganismiPhaeodactylum tricornutum (strain CCAP 1055/1)
Taxonomic identifieri556484 [NCBI]
Taxonomic lineageiEukaryotaStramenopilesBacillariophytaBacillariophyceaeBacillariophycidaeNaviculalesPhaeodactylaceaePhaeodactylum
ProteomesiUP000000759: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi2850.JGI34010.

Structurei

3D structure databases

ProteinModelPortaliB7FUH0.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000215020.
KOiK00814.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.

Sequencei

Sequence statusi: Complete.

B7FUH0-1 [UniParc]FASTAAdd to Basket

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MYPGLRKMEY AVRGKVVIAA DQISDNLASG KSYPFDHIVY TNIGNPQSVG    50
QQPLTWPRQV LALVDLPDAV GIQHPDILRL FPADAVARAK EIKEGLGGHG 100
SGAYSHSKGC RAFRRDIAAF LQDRDGGLPA EPEDIFMTNG ASAGINMMLN 150
ALVADSSCGV MIPIPQYPIY SATIDLLGGQ KVGYYLNEAN GWELNMEELE 200
RSLQEATEQG IKVNAFVLIN PGNPSGTVLS RTNLQDIVRF CAKHNLVLLA 250
DEVYQENVYD ENAEFVSCKR AAHQVGLLED DGIELVSFHS ISKGVFGECG 300
RRGGYMELVG FNADVKDELY KLASANLCAT VSGQIMTSLM VRGPDQGDVS 350
YESHQAEKKA IFESLRRRSK IVSDGLNNIP GISCQTATGS MYCFPSVEMP 400
KGALPAAEKM GVSPDTLYCM SLLERTGLCV VPASGFGQRE GRYGFRTTFL 450
PSEDEMARAV EQIREHYHEF CEMYA 475
Length:475
Mass (Da):51,937
Last modified:February 10, 2009 - v1
Checksum:i578A301D8C2712AD
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000607 Genomic DNA. Translation: EEC50258.1.
RefSeqiXP_002178593.1. XM_002178557.1.
UniGeneiPtc.1179.

Genome annotation databases

EnsemblProtistsiPhatr34010; Phatr34010; Phatr34010.
GeneIDi7197795.
KEGGipti:PHATRDRAFT_34010.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000607 Genomic DNA. Translation: EEC50258.1 .
RefSeqi XP_002178593.1. XM_002178557.1.
UniGenei Ptc.1179.

3D structure databases

ProteinModelPortali B7FUH0.
ModBasei Search...

Protein-protein interaction databases

STRINGi 2850.JGI34010.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblProtistsi Phatr34010 ; Phatr34010 ; Phatr34010 .
GeneIDi 7197795.
KEGGi pti:PHATRDRAFT_34010.

Phylogenomic databases

HOGENOMi HOG000215020.
KOi K00814.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
Pfami PF00155. Aminotran_1_2. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The Phaeodactylum genome reveals the evolutionary history of diatom genomes."
    Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A., Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A., Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T.
    , Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P., Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C., Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D., Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G., La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J., Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A., Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L., Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A., Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R., Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S., Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y., Grigoriev I.V.
    Nature 456:239-244(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CCAP 1055/1Imported.
  2. Cited for: GENOME REANNOTATION.
    Strain: CCAP 1055/1Imported.

Entry informationi

Entry nameiB7FUH0_PHATC
AccessioniPrimary (citable) accession number: B7FUH0
Entry historyi
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: May 14, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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