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B7FUH0 (B7FUH0_PHATC) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:PHATRDRAFT_34010 EMBL EEC50258.1
OrganismPhaeodactylum tricornutum (strain CCAP 1055/1) [Reference proteome]
Taxonomic identifier556484 [NCBI]
Taxonomic lineageEukaryotaStramenopilesBacillariophytaBacillariophyceaeBacillariophycidaeNaviculalesPhaeodactylaceaePhaeodactylum

Protein attributes

Sequence length475 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
B7FUH0 [UniParc].

Last modified February 10, 2009. Version 1.
Checksum: 578A301D8C2712AD

FASTA47551,937
        10         20         30         40         50         60 
MYPGLRKMEY AVRGKVVIAA DQISDNLASG KSYPFDHIVY TNIGNPQSVG QQPLTWPRQV 

        70         80         90        100        110        120 
LALVDLPDAV GIQHPDILRL FPADAVARAK EIKEGLGGHG SGAYSHSKGC RAFRRDIAAF 

       130        140        150        160        170        180 
LQDRDGGLPA EPEDIFMTNG ASAGINMMLN ALVADSSCGV MIPIPQYPIY SATIDLLGGQ 

       190        200        210        220        230        240 
KVGYYLNEAN GWELNMEELE RSLQEATEQG IKVNAFVLIN PGNPSGTVLS RTNLQDIVRF 

       250        260        270        280        290        300 
CAKHNLVLLA DEVYQENVYD ENAEFVSCKR AAHQVGLLED DGIELVSFHS ISKGVFGECG 

       310        320        330        340        350        360 
RRGGYMELVG FNADVKDELY KLASANLCAT VSGQIMTSLM VRGPDQGDVS YESHQAEKKA 

       370        380        390        400        410        420 
IFESLRRRSK IVSDGLNNIP GISCQTATGS MYCFPSVEMP KGALPAAEKM GVSPDTLYCM 

       430        440        450        460        470 
SLLERTGLCV VPASGFGQRE GRYGFRTTFL PSEDEMARAV EQIREHYHEF CEMYA 

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References

« Hide 'large scale' references
[1]"The Phaeodactylum genome reveals the evolutionary history of diatom genomes."
Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A., Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A., Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T. expand/collapse author list , Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P., Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C., Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D., Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G., La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J., Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A., Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L., Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A., Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R., Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S., Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y., Grigoriev I.V.
Nature 456:239-244(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CCAP 1055/1 EMBL EEC50258.1.
[2]Diatom Consortium
Grigoriev I., Grimwood J., Kuo A., Otillar R.P., Salamov A., Detter J.C., Lindquist E., Shapiro H., Lucas S., Glavina del Rio T., Pitluck S., Rokhsar D., Bowler C.
Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: CCAP 1055/1 EMBL EEC50258.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM000607 Genomic DNA. Translation: EEC50258.1.
RefSeqXP_002178593.1. XM_002178557.1.
UniGenePtc.1179.

3D structure databases

ProteinModelPortalB7FUH0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING2850.JGI34010.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsPhatr34010; Phatr34010; Phatr34010.
GeneID7197795.
KEGGpti:PHATRDRAFT_34010.

Phylogenomic databases

HOGENOMHOG000215020.
KOK00814.
ProtClustDBCLSN2710020.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB7FUH0_PHATC
AccessionPrimary (citable) accession number: B7FUH0
Entry history
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: November 13, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)