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B7FUH0

- B7FUH0_PHATC

UniProt

B7FUH0 - B7FUH0_PHATC

Protein
Submitted name:

Predicted protein

Gene

PHATRDRAFT_34010

Organism
Phaeodactylum tricornutum (strain CCAP 1055/1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 28 (01 Oct 2014)
      Sequence version 1 (10 Feb 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. catalytic activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. biosynthetic process Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Predicted proteinImported
    Gene namesi
    ORF Names:PHATRDRAFT_34010Imported
    OrganismiPhaeodactylum tricornutum (strain CCAP 1055/1)Imported
    Taxonomic identifieri556484 [NCBI]
    Taxonomic lineageiEukaryotaStramenopilesBacillariophytaBacillariophyceaeBacillariophycidaeNaviculalesPhaeodactylaceaePhaeodactylum
    ProteomesiUP000000759: Unassembled WGS sequence

    Interactioni

    Protein-protein interaction databases

    STRINGi2850.JGI34010.

    Structurei

    3D structure databases

    ProteinModelPortaliB7FUH0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000215020.
    KOiK00814.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR004839. Aminotransferase_I/II.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PfamiPF00155. Aminotran_1_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B7FUH0-1 [UniParc]FASTAAdd to Basket

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    MYPGLRKMEY AVRGKVVIAA DQISDNLASG KSYPFDHIVY TNIGNPQSVG    50
    QQPLTWPRQV LALVDLPDAV GIQHPDILRL FPADAVARAK EIKEGLGGHG 100
    SGAYSHSKGC RAFRRDIAAF LQDRDGGLPA EPEDIFMTNG ASAGINMMLN 150
    ALVADSSCGV MIPIPQYPIY SATIDLLGGQ KVGYYLNEAN GWELNMEELE 200
    RSLQEATEQG IKVNAFVLIN PGNPSGTVLS RTNLQDIVRF CAKHNLVLLA 250
    DEVYQENVYD ENAEFVSCKR AAHQVGLLED DGIELVSFHS ISKGVFGECG 300
    RRGGYMELVG FNADVKDELY KLASANLCAT VSGQIMTSLM VRGPDQGDVS 350
    YESHQAEKKA IFESLRRRSK IVSDGLNNIP GISCQTATGS MYCFPSVEMP 400
    KGALPAAEKM GVSPDTLYCM SLLERTGLCV VPASGFGQRE GRYGFRTTFL 450
    PSEDEMARAV EQIREHYHEF CEMYA 475
    Length:475
    Mass (Da):51,937
    Last modified:February 10, 2009 - v1
    Checksum:i578A301D8C2712AD
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000607 Genomic DNA. Translation: EEC50258.1.
    RefSeqiXP_002178593.1. XM_002178557.1.
    UniGeneiPtc.1179.

    Genome annotation databases

    EnsemblProtistsiPhatr34010; Phatr34010; Phatr34010.
    GeneIDi7197795.
    KEGGipti:PHATRDRAFT_34010.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000607 Genomic DNA. Translation: EEC50258.1 .
    RefSeqi XP_002178593.1. XM_002178557.1.
    UniGenei Ptc.1179.

    3D structure databases

    ProteinModelPortali B7FUH0.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 2850.JGI34010.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi Phatr34010 ; Phatr34010 ; Phatr34010 .
    GeneIDi 7197795.
    KEGGi pti:PHATRDRAFT_34010.

    Phylogenomic databases

    HOGENOMi HOG000215020.
    KOi K00814.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR004839. Aminotransferase_I/II.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    Pfami PF00155. Aminotran_1_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The Phaeodactylum genome reveals the evolutionary history of diatom genomes."
      Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A., Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A., Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T.
      , Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P., Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C., Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D., Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G., La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J., Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A., Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L., Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A., Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R., Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S., Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y., Grigoriev I.V.
      Nature 456:239-244(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CCAP 1055/1Imported.
    2. Cited for: GENOME REANNOTATION.
      Strain: CCAP 1055/1Imported.

    Entry informationi

    Entry nameiB7FUH0_PHATC
    AccessioniPrimary (citable) accession number: B7FUH0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 10, 2009
    Last sequence update: February 10, 2009
    Last modified: October 1, 2014
    This is version 28 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3