B7FQN4 (B7FQN4_PHATC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EEC51899.1

Gene names

ORF Names:

PHATRDRAFT_6025 EMBL EEC51899.1

Organism

Phaeodactylum tricornutum (strain CCAP 1055/1) [Reference proteome]

Taxonomic identifier

556484 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Stramenopiles › Bacillariophyta › Bacillariophyceae › Bacillariophycidae › Naviculales › Phaeodactylaceae › Phaeodactylum › Phaeodactylum tricornutum

Protein attributes

Sequence length	147 AA.
Sequence status	Fragment.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL EEC51899.1
	Non-terminal residue	147	1	EMBL EEC51899.1

Sequences

	Sequence		Length	Mass (Da)
	B7FQN4 [UniParc]. Last modified February 10, 2009. Version 1. Checksum: F3C7B1E7800F7E0D	FASTA	147	17,488
	10 20 30 40 50 60 PKRFKSSYIC FFMAKQNEIK EELGEKATVT AISKRSAEMW KHLPTEERTH WDDVAIKDKQ 70 80 90 100 110 120 RYMVEKASYT GPWQVPWKRA KKDPSAPKRP MSAFLYFSLG RRSDLKKKHP EIKNTEVSRL 130 140 LGEMWRSASE EQRKPHVDKE KAEREKY

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The Phaeodactylum genome reveals the evolutionary history of diatom genomes." Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A., Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A., Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T. , Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P., Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C., Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D., Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G., La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J., Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A., Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L., Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A., Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R., Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S., Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y., Grigoriev I.V. Nature 456:239-244(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CCAP 1055/1 EMBL EEC51899.1.
[2]	Diatom Consortium Grigoriev I., Grimwood J., Kuo A., Otillar R.P., Salamov A., Detter J.C., Lindquist E., Shapiro H., Lucas S., Glavina del Rio T., Pitluck S., Rokhsar D., Bowler C. Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: CCAP 1055/1 EMBL EEC51899.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000605 Genomic DNA. Translation: EEC51899.1.
RefSeq	XP_002177436.1. XM_002177400.1.
UniGene	Ptc.864.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblProtists	Phatr6025; Phatr6025; Phatr6025.
GeneID	7196730.
KEGG	pti:PHATRDRAFT_6025.
Phylogenomic databases
HOGENOM	HOG000178832.
ProtClustDB	CLSN2709048.
Family and domain databases
Gene3D	1.10.30.10. 2 hits.
InterPro	IPR009071. HMG_box_dom. [Graphical view]
Pfam	PF00505. HMG_box. 2 hits. [Graphical view]
SMART	SM00398. HMG. 2 hits. [Graphical view]
SUPFAM	SSF47095. HMG-box. 2 hits.
PROSITE	PS50118. HMG_BOX_2. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B7FQN4_PHATC

Accession

Primary (citable) accession number: B7FQN4

Entry history

Integrated into UniProtKB/TrEMBL:	February 10, 2009
Last sequence update:	February 10, 2009
Last modified:	May 1, 2013
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)