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B7FPQ3 (B7FPQ3_PHATC) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length226 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2.

Sequence similarities

Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Sequences

Sequence LengthMass (Da)Tools
B7FPQ3 [UniParc].

Last modified February 10, 2009. Version 1.
Checksum: 0C6BC265970545E2

FASTA22624,778
        10         20         30         40         50         60 
MSGSKIIVDS ALRAAVNLRS SKIPTELAKS SAALFSAYGG AKKHELPTLT YDYASLEPAI 

        70         80         90        100        110        120 
SAETMELHHS KHHNTYVTNL NVTLEKMDSA LTSSDISALI GLQGALKFNG GGHLNHTLFW 

       130        140        150        160        170        180 
DLESAIKESF GDFEKLKTEM SAKTVAVQGS GWGWLGYNKS TGRLEIATCA NQDPLEATTG 

       190        200        210        220 
LAPLLGIDVW EHAYYVDYRN VRPDYVKNIW DIINWDTVAQ RLSATK 

« Hide

References

« Hide 'large scale' references
[1]"The Phaeodactylum genome reveals the evolutionary history of diatom genomes."
Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A., Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A., Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T. expand/collapse author list , Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P., Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C., Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D., Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G., La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J., Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A., Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L., Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A., Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R., Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S., Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y., Grigoriev I.V.
Nature 456:239-244(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CCAP 1055/1 EMBL EEC51716.1.
[2]Diatom Consortium
Grigoriev I., Grimwood J., Kuo A., Otillar R.P., Salamov A., Detter J.C., Lindquist E., Shapiro H., Lucas S., Glavina del Rio T., Pitluck S., Rokhsar D., Bowler C.
Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: CCAP 1055/1 EMBL EEC51716.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM000605 Genomic DNA. Translation: EEC51716.1.
RefSeqXP_002177253.1. XM_002177217.1.
UniGenePtc.3632.

3D structure databases

ProteinModelPortalB7FPQ3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING2850.JGI42832.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsPhatr42832; Phatr42832; Phatr42832.
GeneID7196432.
KEGGpti:PHATRDRAFT_42832.

Phylogenomic databases

HOGENOMHOG000013583.
KOK04564.

Family and domain databases

InterProIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERPTHR11404. PTHR11404. 1 hit.
PfamPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFPIRSF000349. SODismutase. 1 hit.
PRINTSPR01703. MNSODISMTASE.
SUPFAMSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB7FPQ3_PHATC
AccessionPrimary (citable) accession number: B7FPQ3
Entry history
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: July 9, 2014
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)