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Protein
Submitted name:

cDNA clone:006-203-F02, full insert sequence

Gene
N/A
Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA clone:006-203-F02, full insert sequenceImported
Submitted name:
cDNA clone:J033136L03, full insert sequenceImported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Organism-specific databases

GrameneiB7E411.

Expressioni

Gene expression databases

ExpressionAtlasiB7E411. baseline.

Interactioni

Protein-protein interaction databases

STRINGi39946.BGIOSIBCE032859.

Structurei

3D structure databases

SMRiB7E411. Positions 5-225.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK00799.
OMAiGMVFTCK.

Family and domain databases

Gene3Di1.20.1050.10. 1 hit.
3.40.30.10. 1 hit.
InterProiIPR010987. Glutathione-S-Trfase_C-like.
IPR004045. Glutathione_S-Trfase_N.
IPR012336. Thioredoxin-like_fold.
[Graphical view]
PfamiPF13417. GST_N_3. 1 hit.
[Graphical view]
SUPFAMiSSF47616. SSF47616. 1 hit.
SSF52833. SSF52833. 1 hit.
PROSITEiPS50405. GST_CTER. 1 hit.
PS50404. GST_NTER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B7E411-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGSGELKLL GVWSSPYAIR VRVVLNLKSL PYEYVEENLG DKSDLLLASN
60 70 80 90 100
PVHKSVPVLL HAGRPVNESQ VIVQYIDEVW PGGAGGRPSV MPSDPYERAV
110 120 130 140 150
ARFWAAYVDD KVRPAWLAIL FGSKTEEERA AAVAQAVAAL ETLEGAFGEC
160 170 180 190 200
SKGKPFFGGD GVGFVDVVLG GYLGWFTAID KLIGRRLIDP ARTPALAAWE
210 220 230
ERFRATDAAK GVVPDDADKL LEFRQTLLRW SASKAK
Length:236
Mass (Da):25,656
Last modified:February 10, 2009 - v1
Checksum:i60A5299744CB1F6C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK059760 mRNA. Translation: BAG87108.1.
AK103699 mRNA. Translation: BAG96210.1.
RefSeqiNP_001065141.1. NM_001071676.1.
UniGeneiOs.4762.

Genome annotation databases

GeneIDi4349207.
KEGGiosa:4349207.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK059760 mRNA. Translation: BAG87108.1.
AK103699 mRNA. Translation: BAG96210.1.
RefSeqiNP_001065141.1. NM_001071676.1.
UniGeneiOs.4762.

3D structure databases

SMRiB7E411. Positions 5-225.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39946.BGIOSIBCE032859.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi4349207.
KEGGiosa:4349207.

Organism-specific databases

GrameneiB7E411.

Phylogenomic databases

KOiK00799.
OMAiGMVFTCK.

Gene expression databases

ExpressionAtlasiB7E411. baseline.

Family and domain databases

Gene3Di1.20.1050.10. 1 hit.
3.40.30.10. 1 hit.
InterProiIPR010987. Glutathione-S-Trfase_C-like.
IPR004045. Glutathione_S-Trfase_N.
IPR012336. Thioredoxin-like_fold.
[Graphical view]
PfamiPF13417. GST_N_3. 1 hit.
[Graphical view]
SUPFAMiSSF47616. SSF47616. 1 hit.
SSF52833. SSF52833. 1 hit.
PROSITEiPS50405. GST_CTER. 1 hit.
PS50404. GST_NTER. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice."
    Kikuchi S., Satoh K., Nagata T., Kawagashira N., Doi K., Kishimoto N., Yazaki J., Ishikawa M., Yamada H., Ooka H., Hotta I., Kojima K., Namiki T., Ohneda E., Yahagi W., Suzuki K., Li C., Ohtsuki K.
    , Shishiki T., Otomo Y., Murakami K., Iida Y., Sugano S., Fujimura T., Suzuki Y., Tsunoda Y., Kurosaki T., Kodama T., Masuda H., Kobayashi M., Xie Q., Lu M., Narikawa R., Sugiyama A., Mizuno K., Yokomizo S., Niikura J., Ikeda R., Ishibiki J., Kawamata M., Yoshimura A., Miura J., Kusumegi T., Oka M., Ryu R., Ueda M., Matsubara K., Kawai J., Carninci P., Adachi J., Aizawa K., Arakawa T., Fukuda S., Hara A., Hashidume W., Hayatsu N., Imotani K., Ishii Y., Itoh M., Kagawa I., Kondo S., Konno H., Miyazaki A., Osato N., Ota Y., Saito R., Sasaki D., Sato K., Shibata K., Shinagawa A., Shiraki T., Yoshino M., Hayashizaki Y.
    Science 301:376-379(2002)
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiB7E411_ORYSJ
AccessioniPrimary (citable) accession number: B7E411
Entry historyi
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: April 1, 2015
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.