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B6ZZX1 (B6ZZX1_ECO57) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Ribonuclease E EMBL EEC26918.1
EC=3.1.4.- EMBL EEC26918.1
Gene names
Name:rne EMBL EEC26918.1
ORF Names:ESCCO14588_2915 EMBL EEC26918.1
OrganismEscherichia coli O157:H7 str. TW14588 EMBL EEC26918.1
Taxonomic identifier502346 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia ›

Protein attributes

Sequence length1061 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Ontologies

Keywords
   Molecular functionHydrolase EMBL EEC26918.1
Gene Ontology (GO)
   Biological_processRNA processing

Inferred from electronic annotation. Source: InterPro

   Molecular_functionRNA binding

Inferred from electronic annotation. Source: InterPro

ribonuclease activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B6ZZX1 [UniParc].

Last modified February 10, 2009. Version 1.
Checksum: C5D6382C7DCF033A

FASTA1,061118,273
        10         20         30         40         50         60 
MKRMLINATQ QEELRVALVD GQRLYDLDIE SPGHEQKKAN IYKGKITRIE PSLEAAFVDY 

        70         80         90        100        110        120 
GAERHGFLPL KEIAREYFPA NYSAHGRPNI KDVLREGQEV IVQIDKEERG NKGAALTTFI 

       130        140        150        160        170        180 
SLAGSYLVLM PNNPRAGGIS RRIEGDDRTE LKEALASLEL PEGMGLIVRT AGVGKSAEAL 

       190        200        210        220        230        240 
QWDLSFRLKH WEAIKKAAES RPAPFLIHQE SNVIVRAFRD YLRQDIGEIL IDNPKVLELA 

       250        260        270        280        290        300 
RQHIAALGRP DFSSKIKLYT GEIPLFSHYQ IESQIESAFQ REVRLPSGGS IVIDSTEALT 

       310        320        330        340        350        360 
AIDINSARAT RGGDIEETAF NTNLEAADEI ARQLRLRDLG GLIVIDFIDM TPVRHQRAVE 

       370        380        390        400        410        420 
NRLREAVRQD RARIQISHIS RFGLLEMSRQ RLSPSLGESS HHVCPRCSGT GTVRDNESLS 

       430        440        450        460        470        480 
LSILRLIEEE ALKENTQEVH AIVPVPIASY LLNEKRSAVN AIETRQDGVR CVIVPNDQME 

       490        500        510        520        530        540 
TPHYHVLRVR KGEETPTLSY MLPKLHEEAM ALPSEEEFAE RKRPEQPALA TFAMPDVPPA 

       550        560        570        580        590        600 
PTPAEPAAPV VAPAPKAAPA TPATPAQPGL LSRFFGALKA LFSGGEETKP TEQPAPKAEA 

       610        620        630        640        650        660 
KPERQQDRRK PRQNNRRDRN ERRDTRSERT EGSDNREENR RNRRQAQQQT AETREGRQQA 

       670        680        690        700        710        720 
EVTEKARTAD EQQAPRRERS RRRNDDKRQA QQEAKALNVE EQSVQETEQE ERVRPVQPRR 

       730        740        750        760        770        780 
KQRQLNQKVR YEQSVAEETV VAPVAEETVA AEPIVQEAPA PRTELVKVPL PVVAQTAPEQ 

       790        800        810        820        830        840 
QEENNADNRD NGGMPRRSRR SPRHLRVSGQ RRRRYRDERY PTQSPMPLTV ACASPELASG 

       850        860        870        880        890        900 
KVWIRYPIVR PQDVQVEEQR EQEEVQVQPM VTEVPVAAAV EPVVSAPVVE EMAEVVEAPV 

       910        920        930        940        950        960 
PVAEPQPEVV ETTHPEVIAA AVTEQPQVIT ESDVAVAQEV AEHAEPVVEP QEETADIEEV 

       970        980        990       1000       1010       1020 
AETAEVVVAE PEVVAQPAAP VVAEVAAEVE TVTAVKPEIT VEHNHATAPM TRAPAPEYVP 

      1030       1040       1050       1060 
EAPRHSDWQR PTFAFEGKGA AGGHTATHHA SAAPARPQPV E

« Hide

References

[1]Sebastian Y., Whittam T.S., Manning S.D., Sutton G.
Submitted (NOV-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: TW14588 EMBL EEC26918.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		ABKY02000003 Genomic DNA. Translation: EEC26918.1.

3D structure databases

ProteinModelPortalB6ZZX1.
SMRB6ZZX1. Positions 1-510.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEEC26918; EEC26918; ESCCO14588_2915.
PATRIC29408149. VBIEscCol82497_2823.

Phylogenomic databases

OMANTKEVHA.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012340. NA-bd_OB-fold.
IPR021968. PNPase_C.
IPR003029. Rbsml_prot_S1_RNA-bd_dom.
IPR019307. RNA-bd_AU-1/RNase_E/G.
IPR022967. RNA-binding_domain_S1.
IPR004659. RNase_E/G.
[Graphical view]
PfamPF12111. PNPase_C. 1 hit.
PF10150. RNase_E_G. 1 hit.
PF00575. S1. 1 hit.
[Graphical view]
SMARTSM00316. S1. 1 hit.
[Graphical view]
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMsTIGR00757. RNaseEG. 1 hit.
PROSITEPS50126. S1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB6ZZX1_ECO57
AccessionPrimary (citable) accession number: B6ZZX1
Entry history
Integrated into UniProtKB/TrEMBL: February 10, 2009
Last sequence update: February 10, 2009
Last modified: April 3, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info