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Protein
Submitted name:

tRNA/rRNA cytosine-C5-methylase

Gene

TON_1966

Organism
Thermococcus onnurineus (strain NA1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

MethyltransferaseImported, Transferase

Enzyme and pathway databases

BioCyciTONN523850:GC7X-2025-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
tRNA/rRNA cytosine-C5-methylaseImported
Gene namesi
Ordered Locus Names:TON_1966Imported
OrganismiThermococcus onnurineus (strain NA1)Imported
Taxonomic identifieri523850 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaeThermococcus
Proteomesi
  • UP000002727 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi523850.TON_1966.

Structurei

3D structure databases

ProteinModelPortaliB6YW92.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini179 – 450272SAM_MT_RSMB_NOPInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiarCOG00974. Archaea.
COG0144. LUCA.
HOGENOMiHOG000037300.
KOiK03500.
OMAiHPRWYVE.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
PROSITEiPS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B6YW92-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MELFYRVSFQ EVVADALMLV EERELSSKHA LERVFKKVAG KDREKARGLA
60 70 80 90 100
HAYVFEIEKW RAKIDFIINS VLKGSTVEDL DPYLANLLRI GTFEIHFRKV
110 120 130 140 150
PPAIATDSII RVVKGHFDFS RAKFVNALMH EIEKFDVERA LKRLKERDRI
160 170 180 190 200
EWLSVRFSHP RWYVEYAVEL FGYDEAVRLL LSNNKAQRYY VRANTLKTDV
210 220 230 240 250
DSLRDYLEEN GVRTALTPLP DVLKILEYKT PVTRLNWYKQ GKFVIQDLAS
260 270 280 290 300
AYVAHVLAPE PGERVLDLAA APGSKTFHAA ALMENKGEIV AVDYSYDRLM
310 320 330 340 350
RMKEKMKLLG IKNVKLVHAD GQSFRDKEKF DKIILDAPCS SSGTYRQFPE
360 370 380 390 400
VKWRFDEKKI KRIINVQRNM LRNAHENLRD GGEMTYSTCS IRIDEDEENV
410 420 430 440 450
LFAINRVGLE LIDYPFSWGD RGFLEIGDKV FRAWTHRHDC NSFFIAKLKK
Length:450
Mass (Da):52,410
Last modified:January 20, 2009 - v1
Checksum:i482C382864A35A98
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000855 Genomic DNA. Translation: ACJ17458.1.
RefSeqiWP_012572929.1. NC_011529.1.

Genome annotation databases

EnsemblBacteriaiACJ17458; ACJ17458; TON_1966.
GeneIDi7017644.
KEGGiton:TON_1966.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000855 Genomic DNA. Translation: ACJ17458.1.
RefSeqiWP_012572929.1. NC_011529.1.

3D structure databases

ProteinModelPortaliB6YW92.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi523850.TON_1966.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACJ17458; ACJ17458; TON_1966.
GeneIDi7017644.
KEGGiton:TON_1966.

Phylogenomic databases

eggNOGiarCOG00974. Archaea.
COG0144. LUCA.
HOGENOMiHOG000037300.
KOiK03500.
OMAiHPRWYVE.

Enzyme and pathway databases

BioCyciTONN523850:GC7X-2025-MONOMER.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
PROSITEiPS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The complete genome sequence of Thermococcus onnurineus NA1 reveals a mixed heterotrophic and carboxydotrophic metabolism."
    Lee H.S., Kang S.G., Bae S.S., Lim J.K., Cho Y., Kim Y.J., Jeon J.H., Cha S.S., Kwon K.K., Kim H.T., Park C.J., Lee H.W., Kim S.I., Chun J., Colwell R.R., Kim S.J., Lee J.H.
    J. Bacteriol. 190:7491-7499(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NA1Imported.

Entry informationi

Entry nameiB6YW92_THEON
AccessioniPrimary (citable) accession number: B6YW92
Entry historyi
Integrated into UniProtKB/TrEMBL: January 20, 2009
Last sequence update: January 20, 2009
Last modified: July 6, 2016
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.