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B6YTD8 (B6YTD8_THEON) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:TON_0340 EMBL ACJ15825.1
OrganismThermococcus onnurineus (strain NA1) [Complete proteome] [HAMAP] EMBL ACJ15825.1
Taxonomic identifier523850 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaeThermococcus

Protein attributes

Sequence length268 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Metal binding211Zinc 1
Metal binding311Zinc 2; via tele nitrogen
Metal binding591Zinc 3 PDB 4DWZ PDB 4FC5
Metal binding611Zinc 4 PDB 4DWZ PDB 4FC5
Metal binding1151Zinc 5 PDB 4DWZ PDB 4FC5
Metal binding1571Zinc 4 PDB 4DWZ PDB 4FC5
Metal binding1571Zinc 5 PDB 4DWZ PDB 4FC5
Metal binding1611Zinc 5 PDB 4DWZ PDB 4FC5
Metal binding1741Zinc 1; via tele nitrogen
Metal binding2101Zinc 2
Metal binding2461Zinc 3 PDB 4DWZ PDB 4FC5
Metal binding2461Zinc 4 PDB 4DWZ PDB 4FC5

Sequences

Sequence LengthMass (Da)Tools
B6YTD8 [UniParc].

Last modified January 20, 2009. Version 1.
Checksum: 516D29482386E953

FASTA26828,963
        10         20         30         40         50         60 
MIAHLINTDI GNRGVLKVYL DYRRKNFNFL HNSTKMFLDN LERVLIVTGF PIPPMMVAET 

        70         80         90        100        110        120 
DGPPGALAIY RAVEMLGGKA EILTYSEVEK ALEPFGVSLA RTPEPEDYSL IISVETPGRA 

       130        140        150        160        170        180 
ADGRYYSMSA LEIKRDPLDG IFLKARALGI PTIGVGDGGN EIGMGKIREL VVGHVPHGEK 

       190        200        210        220        230        240 
IASVVETDEL IVSAVSNWGA YGLVAQASIE VGRNLLEGWD ERRVIEAISS AGLIDGVSKT 

       250        260 
LAPSVDGIRL MVHEGIVELL KAVVDEAI 

« Hide

References

« Hide 'large scale' references
[1]"The complete genome sequence of Thermococcus onnurineus NA1 reveals a mixed heterotrophic and carboxydotrophic metabolism."
Lee H.S., Kang S.G., Bae S.S., Lim J.K., Cho Y., Kim Y.J., Jeon J.H., Cha S.S., Kwon K.K., Kim H.T., Park C.J., Lee H.W., Kim S.I., Chun J., Colwell R.R., Kim S.J., Lee J.H.
J. Bacteriol. 190:7491-7499(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NA1 EMBL ACJ15825.1.
[2]"Experimental phasing using zinc anomalous scattering."
Cha S.S., An Y.J., Jeong C.S., Kim M.K., Lee S.G., Lee K.H., Oh B.H.
Acta Crystallogr. D 68:1253-1258(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.30 ANGSTROMS) IN COMPLEX WITH ZINC.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000855 Genomic DNA. Translation: ACJ15825.1.
RefSeqYP_002306722.1. NC_011529.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4DWZX-ray2.70A/B/C/D/E/F1-268[»]
4FC5X-ray2.30A/B/C/D/E/F1-268[»]
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING523850.TON_0340.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACJ15825; ACJ15825; TON_0340.
GeneID7018003.
KEGGton:TON_0340.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG79724.
HOGENOMHOG000295235.
OMANWGAYGL.
ProtClustDBCLSK785596.

Enzyme and pathway databases

BioCycTONN523850:GC7X-357-MONOMER.

Family and domain databases

InterProIPR025504. DUF4392.
[Graphical view]
PfamPF14336. DUF4392. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB6YTD8_THEON
AccessionPrimary (citable) accession number: B6YTD8
Entry history
Integrated into UniProtKB/TrEMBL: January 20, 2009
Last sequence update: January 20, 2009
Last modified: April 16, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)