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B6YQ33 (B6YQ33_AZOPC) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length357 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage By similarity. HAMAP-Rule MF_00268 RuleBase RU000526 SAAS SAAS020584

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00268 SAAS SAAS020584.

Sequence similarities

Belongs to the RecA family. HAMAP-Rule MF_00268 RuleBase RU004527

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding80 – 878ATP By similarity HAMAP-Rule MF_00268

Sequences

Sequence LengthMass (Da)Tools
B6YQ33 [UniParc].

Last modified January 20, 2009. Version 1.
Checksum: B4B17E768E8472CC

FASTA35739,149
        10         20         30         40         50         60 
MYSKDDNTII KGQITPNADR LEALRIATDK IEKNFGKGSI MKMGDNAIEE ISVIPTGSIS 

        70         80         90        100        110        120 
LNIALGVGGY PRGRIIEIYG PESSGKTTLA IHAIAEAQKT GGIAAFIDAE HAFDRFYAEK 

       130        140        150        160        170        180 
LGVDINNLWI SQPDSGEQAL EIGEQLIRSS AIDIIVIDSV AALTPKAELE GEMGESKMGL 

       190        200        210        220        230        240 
QARLMSQALR KLTSTISKTN TTCIFINQLR DKIGVIFGNP ETTTGGNALK FYSSVRLDIR 

       250        260        270        280        290        300 
KASAIKDGDE VKGNQTKVKV VKNKVAPPFR KAEFDIMFKE GISKTGELID LGTEWEIIKK 

       310        320        330        340        350 
SGSWYSYNDV KLGQGREASK DYLKNKPELM EKIEIQIIEK SKSNNEKIAN SKYPPVI

« Hide

References

[1]"Genome of an endosymbiont coupling N2 fixation to cellulolysis within protist cells in termite gut."
Hongoh Y., Sharma V.K., Prakash T., Noda S., Toh H., Taylor T.D., Kudo T., Sakaki Y., Toyoda A., Hattori M., Ohkuma M.
Science 322:1108-1109(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP010656 Genomic DNA. Translation: BAG83305.1.
RefSeqYP_002308716.1. NC_011565.1.

3D structure databases

ProteinModelPortalB6YQ33.
ModBaseSearch...

Protein-protein interaction databases

STRING511995.CFPG_042.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAG83305; BAG83305; CFPG_042.
GeneID7039965.
KEGGaps:CFPG_042.
PATRIC31961573. VBICanAzo57536_0176.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0468.
HOGENOMHOG000264120.
KOK03553.
OMAPEICAEI.

Family and domain databases

Gene3D3.30.250.10. 1 hit.
HAMAPMF_00268. RecA.
InterProIPR003593. AAA+_ATPase.
IPR013765. DNA_recomb/repair_RecA.
IPR020584. DNA_recomb/repair_RecA_CS.
IPR020588. DNA_recomb_RecA/RadB_ATP-bd.
IPR023400. RecA_C.
IPR020587. RecA_monomer-monomer_interface.
[Graphical view]
PANTHERPTHR22942:SF1. PTHR22942:SF1. 1 hit.
PfamPF00154. RecA. 1 hit.
[Graphical view]
PRINTSPR00142. RECA.
SMARTSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMSSF54752. SSF54752. 1 hit.
TIGRFAMsTIGR02012. tigrfam_recA. 1 hit.
PROSITEPS00321. RECA_1. 1 hit.
PS50162. RECA_2. 1 hit.
PS50163. RECA_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB6YQ33_AZOPC
AccessionPrimary (citable) accession number: B6YQ33
Entry history
Integrated into UniProtKB/TrEMBL: January 20, 2009
Last sequence update: January 20, 2009
Last modified: May 1, 2013
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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