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B6YQ02 (B6YQ02_AZOPC) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Transcription antitermination protein nusG RuleBase RU000538
Gene names
Ordered Locus Names:CFPG_011
OrganismAzobacteroides pseudotrichonymphae genomovar. CFP2 [Complete proteome] [HAMAP]
Taxonomic identifier511995 [NCBI]
Taxonomic lineageBacteria › Bacteroidetes › Bacteroidia › Bacteroidales › Candidatus Azobacteroides

Protein attributes

Sequence length177 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase By similarity. SAAS SAAS006645 RuleBase RU000538

Sequence similarities

Belongs to the nusG family. RuleBase RU003559

Sequences

Sequence LengthMass (Da)Tools
B6YQ02 [UniParc].

Last modified January 20, 2009. Version 1.
Checksum: 06AF8D3F8E85DD26

FASTA17720,490
        10         20         30         40         50         60 
MERRFYVLRA VNGKESKVKE CLESEIRKNS NLRDCILQVI VPTERVVRNI RGKNYRKERA 

        70         80         90        100        110        120 
FLPGYVVIEA VLKSEVVHFI KSINFVSGFL GGNRPVPLRP VEVSRILGQV DEMQNRTEEF 

       130        140        150        160        170 
DVNYNVGETV KITFGPFTGF YGEIEEVHPD KKRLKVMVKI FGRKSPLELG YLQVEKE

« Hide

References

[1]"Genome of an endosymbiont coupling N2 fixation to cellulolysis within RT protist cells in termite gut."
Hongoh Y., Sharma V.K., Prakash T., Noda S., Toh H., Taylor T.D., Kudo T., Sakaki Y., Toyoda A., Hattori M., Ohkuma M.
Science 322:1108-1109(2008) [PubMed: 19008447] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP010656 Genomic DNA. Translation: BAG83274.1.
RefSeqYP_002308685.1. NC_011565.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGB6YQ02.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7039876.
GenomeReviewsGene locus CFPG_011 in contig AP010656_GR.
KEGGaps:CFPG_011.
PATRIC31961497. VBICanAzo57536_0140.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG751162.
OMAVASGCEK.

Family and domain databases

InterProIPR005824. KOW.
IPR001062. Transcrpt_antiterm_NusG.
IPR006645. Transcrpt_antiterm_NusG_N.
IPR014722. Transl_SH3-like_sub.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
Gene3DG3DSA:2.30.30.30. Ribosomal_L2. 1 hit.
G3DSA:3.30.70.940. Transcrpt_antiterm_NusG_N. 1 hit.
KOK02601.
PfamPF00467. KOW. 1 hit.
PF02357. NusG. 1 hit.
[Graphical view]
PRINTSPR00338. NUSGTNSCPFCT.
SMARTSM00739. KOW. 1 hit.
SM00738. NGN. 1 hit.
[Graphical view]
SUPFAMSSF82679. Transcrpt_antiterm_NusG_N. 1 hit.
SSF50104. Transl_SH3_like. 1 hit.
TIGRFAMsTIGR00922. NusG. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB6YQ02_AZOPC
AccessionPrimary (citable) accession number: B6YQ02
Entry history
Integrated into UniProtKB/TrEMBL: January 20, 2009
Last sequence update: January 20, 2009
Last modified: December 14, 2011
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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