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B6VKG6 (B6VKG6_PHOAA) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.6.1.19 EMBL CAQ83269.1

4-aminobutyrate aminotransferase (Ec 2.6.1.19)(Gamma-amino-n-butyrat transaminase) (Gaba transaminase) (Glutamate:succinic semialdehyd transaminase) (Gaba aminotransferase) (Gaba-at) EMBL CAR66646.1
EC=2.6.1.19 EMBL CAR66646.1
Gene names
Name:goaG EMBL CAR66646.1
Ordered Locus Names:PAU_01177 EMBL CAQ83269.1
ORF Names:PA-RVA2-4308 EMBL CAR66646.1
OrganismPhotorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77) (Xenorhabdus luminescens (strain 2)) [Complete proteome] [HAMAP] EMBL CAR66646.1
Taxonomic identifier553480 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePhotorhabdus

Protein attributes

Sequence length425 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
B6VKG6 [UniParc].

Last modified December 16, 2008. Version 1.
Checksum: B0FDE7A719D30382

FASTA42545,703
        10         20         30         40         50         60 
MTESMLAKRR SAAIAKGVGV TTQVYAERAE NAEIWDVHGQ RYVDFAAGIA VVNTGHRHPR 

        70         80         90        100        110        120 
VIAAAREQLE QFTHTCHQVV PYENYVALAE RLNRLVPGNF TKKTVFVTTG AEAVENAVKI 

       130        140        150        160        170        180 
ARAATGRSGV VAFSGAFHGR TFLGMSLTGK VAPYKMGFGP LVSDIYRVPF PVGLHGISVE 

       190        200        210        220        230        240 
QTLNALDNLF KADIDPSRVA AIIIEPVQGE GGFYPAPTEL LKALREIADC HGIVLIADEI 

       250        260        270        280        290        300 
QTGFARTGKL FAMEHHEVAA DLTTMAKGLA GGLPLAAVTG RAELMDAVVL GGLGGTYGGN 

       310        320        330        340        350        360 
PVAIAAAHAV LDVIEEEQLN ERATQLGDQL KQRLHELRPR VPQIADVRGL GLMIAVEFNR 

       370        380        390        400        410        420 
ADSQEPDACF TNAVRQKALE RGLILLMCGV HGNVIRFLPP LTIQNNVFDE ALDILESVLL 


DLAEP 

« Hide

References

« Hide 'large scale' references
[1]"Rapid virulence annotation (RVA): identification of virulence factors using a bacterial genome library and multiple invertebrate hosts."
Waterfield N.R., Sanchez-Contreras M., Eleftherianos I., Dowling A., Wilkinson P., Parkhill J., Thomson N., Reynolds S.E., Bode H.B., Dorus S., Ffrench-Constant R.H.
Proc. Natl. Acad. Sci. U.S.A. 105:15967-15972(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ATCC 43949 EMBL CAR66646.1.
[2]Crossman L.C.
Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ATCC43949 EMBL CAQ83269.1.
[3]Thomson N.R.
Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ATCC 43949 EMBL CAR66646.1.
[4]"Comparative genomics of the emerging human pathogen Photorhabdus asymbiotica with the insect pathogen Photorhabdus luminescens."
Wilkinson P., Waterfield N.R., Crossman L., Corton C., Sanchez-Contreras M., Vlisidou I., Barron A., Bignell A., Clark L., Ormond D., Mayho M., Bason N., Smith F., Simmonds M., Churcher C., Harris D., Thompson N.R., Quail M., Parkhill J., ffrench-Constant R.H.
BMC Genomics 10:302-302(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 43949 / 3105-77 and ATCC43949 EMBL CAQ83269.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FM162591 Genomic DNA. Translation: CAQ83269.1.
FM211044 Genomic DNA. Translation: CAR66646.1.
RefSeqYP_003040014.1. NC_012962.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING291112.PAU_01177.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAQ83269; CAQ83269; PAU_01177.
GeneID13861973.
KEGGpay:PAU_01177.
PATRIC20496083. VBIPhoAsy71438_1324.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000020206.
KOK00823.
OMACGKSAIR.
OrthoDBEOG6QVRHN.
ProtClustDBPRK07495.

Enzyme and pathway databases

BioCycPASY291112:GJQ0-1223-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11986. PTHR11986. 1 hit.
PfamPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR00700. GABAtrnsam. 1 hit.
PROSITEPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB6VKG6_PHOAA
AccessionPrimary (citable) accession number: B6VKG6
Secondary accession number(s): C7BQQ3
Entry history
Integrated into UniProtKB/TrEMBL: December 16, 2008
Last sequence update: December 16, 2008
Last modified: January 22, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)