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Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

goaG

Organism
Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77) (Xenorhabdus luminescens (strain 2))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. 4-aminobutyrate transaminase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. gamma-aminobutyric acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciPASY291112:GJQ0-1223-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate aminotransferaseImported (EC:2.6.1.19Imported)
Submitted name:
4-aminobutyrate aminotransferase (Ec 2.6.1.19)(Gamma-amino-n-butyrat transaminase) (Gaba transaminase) (Glutamate:succinic semialdehyd transaminase) (Gaba aminotransferase) (Gaba-at)Imported (EC:2.6.1.19Imported)
Gene namesi
Name:goaGImported
Ordered Locus Names:PAU_01177Imported
ORF Names:PA-RVA2-4308Imported
OrganismiPhotorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77) (Xenorhabdus luminescens (strain 2))Imported
Taxonomic identifieri553480 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePhotorhabdus
ProteomesiUP000002747 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi291112.PAU_01177.

Structurei

3D structure databases

ProteinModelPortaliB6VKG6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000020206.
KOiK00823.
OMAiYHAQYPN.
OrthoDBiEOG6QVRHN.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B6VKG6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTESMLAKRR SAAIAKGVGV TTQVYAERAE NAEIWDVHGQ RYVDFAAGIA
60 70 80 90 100
VVNTGHRHPR VIAAAREQLE QFTHTCHQVV PYENYVALAE RLNRLVPGNF
110 120 130 140 150
TKKTVFVTTG AEAVENAVKI ARAATGRSGV VAFSGAFHGR TFLGMSLTGK
160 170 180 190 200
VAPYKMGFGP LVSDIYRVPF PVGLHGISVE QTLNALDNLF KADIDPSRVA
210 220 230 240 250
AIIIEPVQGE GGFYPAPTEL LKALREIADC HGIVLIADEI QTGFARTGKL
260 270 280 290 300
FAMEHHEVAA DLTTMAKGLA GGLPLAAVTG RAELMDAVVL GGLGGTYGGN
310 320 330 340 350
PVAIAAAHAV LDVIEEEQLN ERATQLGDQL KQRLHELRPR VPQIADVRGL
360 370 380 390 400
GLMIAVEFNR ADSQEPDACF TNAVRQKALE RGLILLMCGV HGNVIRFLPP
410 420
LTIQNNVFDE ALDILESVLL DLAEP
Length:425
Mass (Da):45,703
Last modified:December 15, 2008 - v1
Checksum:iB0FDE7A719D30382
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FM162591 Genomic DNA. Translation: CAQ83269.1.
FM211044 Genomic DNA. Translation: CAR66646.1.
RefSeqiYP_003040014.1. NC_012962.1.

Genome annotation databases

EnsemblBacteriaiCAQ83269; CAQ83269; PAU_01177.
KEGGipay:PAU_01177.
PATRICi20496083. VBIPhoAsy71438_1324.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FM162591 Genomic DNA. Translation: CAQ83269.1.
FM211044 Genomic DNA. Translation: CAR66646.1.
RefSeqiYP_003040014.1. NC_012962.1.

3D structure databases

ProteinModelPortaliB6VKG6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi291112.PAU_01177.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAQ83269; CAQ83269; PAU_01177.
KEGGipay:PAU_01177.
PATRICi20496083. VBIPhoAsy71438_1324.

Phylogenomic databases

HOGENOMiHOG000020206.
KOiK00823.
OMAiYHAQYPN.
OrthoDBiEOG6QVRHN.

Enzyme and pathway databases

BioCyciPASY291112:GJQ0-1223-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Rapid virulence annotation (RVA): identification of virulence factors using a bacterial genome library and multiple invertebrate hosts."
    Waterfield N.R., Sanchez-Contreras M., Eleftherianos I., Dowling A., Wilkinson P., Parkhill J., Thomson N., Reynolds S.E., Bode H.B., Dorus S., Ffrench-Constant R.H.
    Proc. Natl. Acad. Sci. U.S.A. 105:15967-15972(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC 43949Imported.
  2. Crossman L.C.
    Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC43949Imported.
  3. Thomson N.R.
    Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC 43949Imported.
  4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43949 / 3105-77Imported and ATCC43949Imported.

Entry informationi

Entry nameiB6VKG6_PHOAA
AccessioniPrimary (citable) accession number: B6VKG6
Secondary accession number(s): C7BQQ3
Entry historyi
Integrated into UniProtKB/TrEMBL: December 15, 2008
Last sequence update: December 15, 2008
Last modified: March 31, 2015
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.