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B6VJS3 (B6VJS3_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length470 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the G-protein coupled receptor 1 family. RuleBase RU000688

Sequences

Sequence LengthMass (Da)Tools
B6VJS3 [UniParc].

Last modified December 16, 2008. Version 1.
Checksum: A36F839B7550F044

FASTA47052,013
        10         20         30         40         50         60 
MMDVNSSGRP DLYGHLRSLI LPEVGRRLQD LSPDGGAHSV VSSWMPHLLS GFPEVTASPA 

        70         80         90        100        110        120 
PTWDAPPDNV SGCGEQINYG RVEKVVIGSI LTLITLLTIA GNCLVVISVC FVKKLRQPSN 

       130        140        150        160        170        180 
YLIVSLALAD LSVAVAVMPF VSVTDLIGGK WIFGHFFCNV FIAMDVMCCT ASIMTLCVIS 

       190        200        210        220        230        240 
IDRYLGITRP LTYPVRQNGK CMAKMILSVW LLSASITLPP LFGWAQNVND DKVCLISQDF 

       250        260        270        280        290        300 
GYTIYSTAVA FYIPMSVMLF MYYQIYKAAR KSAAKHKFSG FPRVQPESVI SLNGVVKLQK 

       310        320        330        340        350        360 
EVEECANLSR LLKHERKNIS IFKREQKAAT TLGIIVGAFT VCWLPFFLLS TARPFICGTS 

       370        380        390        400        410        420 
CSCIPLWVER TCLWLGYANS LINPFIYAFF NRDLRTTYRS LLQCQYRNIN RKLSAAGMHE 

       430        440        450        460        470 
ALKLAERPER SEFVLMTGAS GVQKALENLP WGNGVNTGIK AVNSVALTKL 

« Hide

References

« Hide 'large scale' references
[1]"Cloning, genomic organization and functionality of 5-HT(7) receptor splice variants in mouse brain."
Gellynck E., Laenen K., Andressen K.W., Lintermans B., De Martelaere K., Matthys A., Levy F.O., Haegeman G., Vanhoenacker P., Van Craenenbroeck K.
Gene 426:23-31(2008)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BALB/C EMBL CAQ76702.1.
[2]"Lineage-specific biology revealed by a finished genome assembly of the mouse."
Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S. expand/collapse author list , Teague B., Potamousis K., Churas C., Place M., Herschleb J., Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., Lindblad-Toh K., Eichler E.E., Ponting C.P.
PLoS Biol. 7:E1000112-E1000112(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: C57BL/6J Ensembl ENSMUSP00000097105.
[3]Ensembl
Submitted (FEB-2012) to UniProtKB
Cited for: IDENTIFICATION.
Strain: C57BL/6J Ensembl ENSMUSP00000097105.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC133874 Genomic DNA. No translation available.
FM178516 mRNA. Translation: CAQ76702.1.
RefSeqXP_006526764.1. XM_006526701.1.
UniGeneMm.254266.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING10090.ENSMUSP00000025712.

Protein family/group databases

GPCRDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000099505; ENSMUSP00000097105; ENSMUSG00000024798.
GeneID15566.
UCSCuc012bkx.1. mouse.

Organism-specific databases

MGIMGI:99841. Htr7.

Phylogenomic databases

GeneTreeENSGT00750000117429.
HOGENOMHOG000239242.
HOVERGENHBG106962.
OMAPTWDAPP.

Gene expression databases

GenevestigatorB6VJS3.

Family and domain databases

Gene3D1.20.1070.10. 1 hit.
InterProIPR001069. 5HT_7_rcpt.
IPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
[Graphical view]
PANTHERPTHR24247:SF3. PTHR24247:SF3. 1 hit.
PfamPF00001. 7tm_1. 1 hit.
[Graphical view]
PRINTSPR00652. 5HT7RECEPTR.
PR00237. GPCRRHODOPSN.
PROSITEPS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio35547190.
SOURCESearch...

Entry information

Entry nameB6VJS3_MOUSE
AccessionPrimary (citable) accession number: B6VJS3
Entry history
Integrated into UniProtKB/TrEMBL: December 16, 2008
Last sequence update: December 16, 2008
Last modified: April 16, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)