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Protein

Histone deacetylase

Gene
N/A
Organism
Zea mays (Maize)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Hydrolysis of an N6-acetyl-lysine residue of a histone to yield a deacetylated histone.SAAS annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionChromatin regulatorSAAS annotation, HydrolaseSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Histone deacetylaseSAAS annotation (EC:3.5.1.98SAAS annotation)
OrganismiZea mays (Maize)Imported
Taxonomic identifieri4577 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeTripsacinaeZea

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliB6SH90
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini34 – 334Hist_deacetylInterPro annotationAdd BLAST301

Phylogenomic databases

eggNOGiKOG1343 Eukaryota
COG0123 LUCA
HOGENOMiHOG000225183

Family and domain databases

Gene3Di3.40.800.20, 1 hit
InterProiView protein in InterPro
IPR000286 His_deacetylse
IPR023801 His_deacetylse_dom
IPR037138 His_deacetylse_dom_sf
IPR023696 Ureohydrolase_dom_sf
PANTHERiPTHR10625 PTHR10625, 1 hit
PfamiView protein in Pfam
PF00850 Hist_deacetyl, 1 hit
PRINTSiPR01270 HDASUPER
SUPFAMiSSF52768 SSF52768, 1 hit

Sequencei

Sequence statusi: Complete.

B6SH90-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEPAPAPPV TAPLVGLLYD ERMCAHATPD GKEHPENPER LRSIWRKLNA
60 70 80 90 100
AGVASRCVAL KAKEAEDKYI ASVHSKRHIK LMKEISSTIY DASRNKIARK
110 120 130 140 150
FNSIYFNKGS SESAVLAAGS VIEVAEKVAA GELSSAIALV RPPGHHAEHD
160 170 180 190 200
EAMGFCLFNN VAVAANYLLN ERPDLGIKKI LIVDWDVHHG NGTQKMFYDD
210 220 230 240 250
PRVLFFSVHR FDYGSFYPAE GDASHCFIGE EAGKGYNINV PWEHGKCGDA
260 270 280 290 300
DYIAAWDHVL LPVTKVFDPD IILVSAGFDA ALGDPLGGCC ITPNGYALLL
310 320 330 340 350
TKLLGFAQGR IVMALEGGYN LRSIANSVYA CAKVLLGDKF TFNTPEMQPF
360 370 380 390 400
ESTWRVIQAV RNELKTCWPV LSSKLPENVS LRIKPAPSEL YASSDSESDS
410 420 430 440 450
EDVDELLGTV ASVNVIEATG VAISEHLSKM KLDDDSLAVK TNSSCSAAEQ
460 470 480 490 500
HPVDSVKVHN NASVVLTKKI SDLSLEWRSD LSKTDVWYAS FGSNMWRPRF
510 520 530 540 550
LCYIQGGKAE GMNIPCCGSR DTSSPKGTVW KTVPHRLLFG RSSTPCWGTG
560 570 580 590 600
GVAFLNPEIN YNEKLYVCMY KITLEQFNDI LFQENRLVLE DGKDGNTVYP
610 620 630 640 650
DSPLIGSSEI KFISTNRAVH LEPIKDSWYS NVLYLGNEDE VPILTMTCPA
660 670 680 690 700
SDIERYKSGE LRLAPPSETY AATLIKGLVE GKQMDADGAA SYINAAAARA

L
Length:701
Mass (Da):76,763
Last modified:December 16, 2008 - v1
Checksum:i47D0570F0B80D7E6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EU952105 mRNA Translation: ACG24223.1
UniGeneiZm.2498

Similar proteinsi

Entry informationi

Entry nameiB6SH90_MAIZE
AccessioniPrimary (citable) accession number: B6SH90
Entry historyiIntegrated into UniProtKB/TrEMBL: December 16, 2008
Last sequence update: December 16, 2008
Last modified: May 23, 2018
This is version 46 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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