B6KRC7 (B6KRC7_TOXGO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
U1 small nuclear ribonucleoprotein, putative EMBL EEB03260.1

Gene names

ORF Names:

TGME49_106380 EMBL EEB03260.1, TGVEG_107850 EMBL EEE28570.1

Organism

Toxoplasma gondii [Reference proteome]

Taxonomic identifier

5811 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Alveolata › Apicomplexa › Conoidasida › Coccidia › Eucoccidiorida › Eimeriorina › Sarcocystidae › Toxoplasma

Protein attributes

Sequence length	215 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 matrin-type zinc finger. SAAS SAAS003604

Ontologies

Keywords
Cellular component	Nucleus SAAS SAAS013085 Virion
Domain	Zinc-finger SAAS SAAS013085
Ligand	Metal-binding RNA-binding SAAS SAAS003604 Viral nucleoprotein EMBL EEB03260.1 Zinc
Molecular function	Ribonucleoprotein SAAS SAAS003604 EMBL EEB03260.1
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	nucleus Inferred from electronic annotation. Source: UniProtKB-KW ribonucleoprotein complex Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	RNA binding Inferred from electronic annotation. Source: UniProtKB-KW zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B6KRC7 [UniParc]. Last modified December 16, 2008. Version 1. Checksum: 81899D2F66829B08	FASTA	215	22,084
	10 20 30 40 50 60 MPKYYCEYCD IYLTHSSPAG RRQHATGRKH INQKIEYFQN LIREPDFMPP QQLDSTVVQR 70 80 90 100 110 120 AVQAAGSGPM PMGPTGGPGF QRGFGGRGGF AGRGGFAGRG GMDGGRGGGR GGFPPIGMSI 130 140 150 160 170 180 GPGGGPPGGG RSGSMCGSHH PQDIRSGGAP GPNSNHFQRP MGPMGFRGPM GPGGPGPLGP 190 200 210 GGLRGPGGPP GNHFGPPGDD VGPRRNMSGF DRERR

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Annotation of Toxoplasma gondii VEG." Lorenzi H., Inman J., Amedeo P., Brunk B., Roos D., Caler E. Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 50861 / VEG.
[2]	Lorenzi H., Inman J., Amedeo P., Brunk B., Roos D., Caler E. Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: VEG EMBL EEE28570.1.
[3]	"Annotation of Toxoplasma gondii ME49." Lorenzi H., Caler E., Galinsky K., Schobel S., Brunk B.P., Roos D.S., Paulsen I. Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ME49 EMBL EEB03260.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	DS984744 Genomic DNA. Translation: EEB03260.1. EQ970696 Genomic DNA. Translation: EEE28570.1.
RefSeq	XP_002370400.1. XM_002370359.1.
UniGene	Tgo.1201.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblProtists	TGME49_106380; TGME49_106380; TGME49_106380.
GeneID	7898686.
KEGG	tgo:TGME49_106380.
Organism-specific databases
EuPathDB	ToxoDB:TGME49_306380.
Phylogenomic databases
KO	K11095.
OMA	YLTHESA.
ProtClustDB	CLSZ2848745.
Family and domain databases
InterPro	IPR000690. Znf_C2H2_matrin. IPR003604. Znf_U1. IPR013085. Znf_U1-C. [Graphical view]
Pfam	PF06220. zf-U1. 1 hit. [Graphical view]
SMART	SM00451. ZnF_U1. 1 hit. [Graphical view]
PROSITE	PS50171. ZF_MATRIN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B6KRC7_TOXGO

Accession

Primary (citable) accession number: B6KRC7
Secondary accession number(s): B9QME7

Entry history

Integrated into UniProtKB/TrEMBL:	December 16, 2008
Last sequence update:	December 16, 2008
Last modified:	May 1, 2013
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)