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B6JPJ3

- B6JPJ3_HELP2

UniProt

B6JPJ3 - B6JPJ3_HELP2

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Protein
Submitted name: Type II R-M system restriction endonuclease
Gene
HPP12_0094
Organism
Helicobacter pylori (strain P12)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: InterPro
  2. Type II site-specific deoxyribonuclease activity Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. DNA restriction-modification system Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

EndonucleaseImported, Hydrolase, Nuclease

Enzyme and pathway databases

BioCyciHPYL570508:GJ8D-101-MONOMER.

Protein family/group databases

REBASEi19174. HpyPIIIP.

Names & Taxonomyi

Protein namesi
Submitted name:
Type II R-M system restriction endonucleaseImported
Gene namesi
Ordered Locus Names:HPP12_0094Imported
OrganismiHelicobacter pylori (strain P12)Imported
Taxonomic identifieri570508 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter
ProteomesiUP000008198: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi570508.HPP12_0094.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG12396.
HOGENOMiHOG000244578.
KOiK01155.
OMAiVYEFICQ.
OrthoDBiEOG60KN76.

Family and domain databases

InterProiIPR011335. Restrct_endonuc-II-like.
IPR021191. Restrct_endonuc_II_DpmII.
IPR007637. Restrct_endonuc_II_DpmII-like.
[Graphical view]
PfamiPF04556. DpnII. 1 hit.
[Graphical view]
PIRSFiPIRSF016080. Restrict_endonuc_II_DpmII. 1 hit.
SUPFAMiSSF52980. SSF52980. 1 hit.

Sequencei

Sequence statusi: Complete.

B6JPJ3-1 [UniParc]FASTAAdd to Basket

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MKNRLPFDTF LKSLKTSNRT LDFFTDWQKC LKNKNEISIA LNHLNFLLGK    50
DTKELKNCIK SLFKEYPKAF DVLNILIAVR DKDDIVRDAN GNFYPLHSYF 100
ENDEKVYEFI CQTGLEQIFC NRNIKDLNDF VFGIEVGLDS NARKNRSGKA 150
MENHLSGLFV QAQLNFKEQV DIREFKDLCQ AFGNDIKKFD FVIFGKNKTY 200
FIEANFYTIS GSKLNEVARS YQDLALKFEA FPNYEFIWIT MAQVGWTLKT 250
NSKKLTNL 258
Length:258
Mass (Da):30,159
Last modified:December 16, 2008 - v1
Checksum:i7015CE51D4244D8B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001217 Genomic DNA. Translation: ACJ07254.1.
RefSeqiYP_002300734.1. NC_011498.1.

Genome annotation databases

EnsemblBacteriaiACJ07254; ACJ07254; HPP12_0094.
GeneIDi7010464.
KEGGihpp:HPP12_0094.
PATRICi20608111. VBIHelPyl2824_0102.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001217 Genomic DNA. Translation: ACJ07254.1 .
RefSeqi YP_002300734.1. NC_011498.1.

3D structure databases

ModBasei Search...

Protein-protein interaction databases

STRINGi 570508.HPP12_0094.

Protein family/group databases

REBASEi 19174. HpyPIIIP.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACJ07254 ; ACJ07254 ; HPP12_0094 .
GeneIDi 7010464.
KEGGi hpp:HPP12_0094.
PATRICi 20608111. VBIHelPyl2824_0102.

Phylogenomic databases

eggNOGi NOG12396.
HOGENOMi HOG000244578.
KOi K01155.
OMAi VYEFICQ.
OrthoDBi EOG60KN76.

Enzyme and pathway databases

BioCyci HPYL570508:GJ8D-101-MONOMER.

Family and domain databases

InterProi IPR011335. Restrct_endonuc-II-like.
IPR021191. Restrct_endonuc_II_DpmII.
IPR007637. Restrct_endonuc_II_DpmII-like.
[Graphical view ]
Pfami PF04556. DpnII. 1 hit.
[Graphical view ]
PIRSFi PIRSF016080. Restrict_endonuc_II_DpmII. 1 hit.
SUPFAMi SSF52980. SSF52980. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The complete genome sequence of Helicobacter pylori strain P12."
    Fischer W., Windhager L., Karnholz A., Zeiller M., Zimmer R., Haas R.
    Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: P12.

Entry informationi

Entry nameiB6JPJ3_HELP2
AccessioniPrimary (citable) accession number: B6JPJ3
Entry historyi
Integrated into UniProtKB/TrEMBL: December 16, 2008
Last sequence update: December 16, 2008
Last modified: September 3, 2014
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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