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B6JPJ3

- B6JPJ3_HELP2

UniProt

B6JPJ3 - B6JPJ3_HELP2

Protein
Submitted name:

Type II R-M system restriction endonuclease

Gene

HPP12_0094

Organism
Helicobacter pylori (strain P12)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 33 (01 Oct 2014)
      Sequence version 1 (16 Dec 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA binding Source: InterPro
    2. Type II site-specific deoxyribonuclease activity Source: InterPro

    GO - Biological processi

    1. DNA restriction-modification system Source: InterPro

    Keywords - Molecular functioni

    EndonucleaseImported, Hydrolase, Nuclease

    Enzyme and pathway databases

    BioCyciHPYL570508:GJ8D-101-MONOMER.

    Protein family/group databases

    REBASEi19174. HpyPIIIP.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Type II R-M system restriction endonucleaseImported
    Gene namesi
    Ordered Locus Names:HPP12_0094Imported
    OrganismiHelicobacter pylori (strain P12)Imported
    Taxonomic identifieri570508 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter
    ProteomesiUP000008198: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi570508.HPP12_0094.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG12396.
    HOGENOMiHOG000244578.
    KOiK01155.
    OMAiVYEFICQ.
    OrthoDBiEOG60KN76.

    Family and domain databases

    InterProiIPR011335. Restrct_endonuc-II-like.
    IPR021191. Restrct_endonuc_II_DpmII.
    IPR007637. Restrct_endonuc_II_DpmII-like.
    [Graphical view]
    PfamiPF04556. DpnII. 1 hit.
    [Graphical view]
    PIRSFiPIRSF016080. Restrict_endonuc_II_DpmII. 1 hit.
    SUPFAMiSSF52980. SSF52980. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B6JPJ3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKNRLPFDTF LKSLKTSNRT LDFFTDWQKC LKNKNEISIA LNHLNFLLGK    50
    DTKELKNCIK SLFKEYPKAF DVLNILIAVR DKDDIVRDAN GNFYPLHSYF 100
    ENDEKVYEFI CQTGLEQIFC NRNIKDLNDF VFGIEVGLDS NARKNRSGKA 150
    MENHLSGLFV QAQLNFKEQV DIREFKDLCQ AFGNDIKKFD FVIFGKNKTY 200
    FIEANFYTIS GSKLNEVARS YQDLALKFEA FPNYEFIWIT MAQVGWTLKT 250
    NSKKLTNL 258
    Length:258
    Mass (Da):30,159
    Last modified:December 16, 2008 - v1
    Checksum:i7015CE51D4244D8B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001217 Genomic DNA. Translation: ACJ07254.1.
    RefSeqiYP_002300734.1. NC_011498.1.

    Genome annotation databases

    EnsemblBacteriaiACJ07254; ACJ07254; HPP12_0094.
    GeneIDi7010464.
    KEGGihpp:HPP12_0094.
    PATRICi20608111. VBIHelPyl2824_0102.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001217 Genomic DNA. Translation: ACJ07254.1 .
    RefSeqi YP_002300734.1. NC_011498.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 570508.HPP12_0094.

    Protein family/group databases

    REBASEi 19174. HpyPIIIP.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACJ07254 ; ACJ07254 ; HPP12_0094 .
    GeneIDi 7010464.
    KEGGi hpp:HPP12_0094.
    PATRICi 20608111. VBIHelPyl2824_0102.

    Phylogenomic databases

    eggNOGi NOG12396.
    HOGENOMi HOG000244578.
    KOi K01155.
    OMAi VYEFICQ.
    OrthoDBi EOG60KN76.

    Enzyme and pathway databases

    BioCyci HPYL570508:GJ8D-101-MONOMER.

    Family and domain databases

    InterProi IPR011335. Restrct_endonuc-II-like.
    IPR021191. Restrct_endonuc_II_DpmII.
    IPR007637. Restrct_endonuc_II_DpmII-like.
    [Graphical view ]
    Pfami PF04556. DpnII. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF016080. Restrict_endonuc_II_DpmII. 1 hit.
    SUPFAMi SSF52980. SSF52980. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The complete genome sequence of Helicobacter pylori strain P12."
      Fischer W., Windhager L., Karnholz A., Zeiller M., Zimmer R., Haas R.
      Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: P12Imported.

    Entry informationi

    Entry nameiB6JPJ3_HELP2
    AccessioniPrimary (citable) accession number: B6JPJ3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 16, 2008
    Last sequence update: December 16, 2008
    Last modified: October 1, 2014
    This is version 33 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3