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B6JKC8 (B6JKC8_OLICO) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:OCAR_7777
OrganismOligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) [Complete proteome] [HAMAP]
Taxonomic identifier504832 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeOligotropha

Protein attributes

Sequence length1246 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentintegral to membrane

Inferred from electronic annotation. Source: InterPro

   Molecular functioncation transmembrane transporter activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B6JKC8 [UniParc].

Last modified December 16, 2008. Version 1.
Checksum: C5334942A75C2F46

FASTA1,246135,890
        10         20         30         40         50         60 
MIARLIAWSA RNLMLVLIGT VFAVTAGIYA LRTLPLDAIP DLSDVQVIVY TEYPGQAPQV 

        70         80         90        100        110        120 
VEDQVTYPLT TAMLTVPKSK VVRGFSFFGV SFVYVIFEDG TDPYWARSRV LEYLNTAARR 

       130        140        150        160        170        180 
LPTGVAPTLG PDATGVGWVY QYAVVAKNMT LAELRSVQDW IVRYGISKAE GVAEVASVGG 

       190        200        210        220        230        240 
FVKQYNIVVD PQKLRAQGIS LDKLRSAVRA SNMDVGGRTV ELSEFEFVVR GRGYLRGIED 

       250        260        270        280        290        300 
IENIVLKTDA GAPLRLRDVA RVELGPDERR GITELNGDGE VVSGIALQRF GANALTVIDN 

       310        320        330        340        350        360 
VKARLSEIAS SLPKGVEIVT VYDRSELIKA AIETLKGTLL EESIIVALVC FVFLLHLRSA 

       370        380        390        400        410        420 
LVAILMLPVG ILMAFAAMKF MGLGANIMSL GGIAIAVGAM IDAAIVMIEN AHKHLERAEP 

       430        440        450        460        470        480 
GTPRTQILID AASEVGPALF FSLLVITVSF LPIFTLEAQE GRMFGPLAYT KTFSMAAAAL 

       490        500        510        520        530        540 
LSITLVPALM VVFVRGRIIP EHKNPVNRFL IWVYRPVIRW VLNAKTLTIM LALVALAITV 

       550        560        570        580        590        600 
WPARQLGSEF MPNLNEGTLM YMPTTLPGLS ITKAAELLQT QDRIIKSFPE VASVYGKAGR 

       610        620        630        640        650        660 
ASTATDPAPT EMFETIINLK PKSEWRPGVT IDSLKAEMDK ALQFPGVSNA WTMPIRARID 

       670        680        690        700        710        720 
MLSTGIRTPV GIKIFGKDLA EMEKIAREVE GVVRSVPGTS SAYAERVIGG YYLEIIPDRI 

       730        740        750        760        770        780 
ALGRYGLTIS DVQDVISTAL GGETVTTTVE GRERYSVNIR YPRALRSNPQ TISTDVQVPL 

       790        800        810        820        830        840 
ASGGSVPLGQ VANVKLTRGA TSIRTENGQL AVYIYVDITG RDLGGYVAEA QQAVAEKVKF 

       850        860        870        880        890        900 
PPGYYVSWSG QFEYLQRAEA RLKIVVPVTL LIIFLLLYLN FRKLTETLMR DAVVAVLAGR 

       910        920        930        940        950        960 
RHLVDVVAGI QHVGRGRRRL HRAGRRRGRD RRRHADLPRT GHGRIEGGRR GHWGTIHARR 

       970        980        990       1000       1010       1020 
SLRRDHARRG GPGAAQDDDR RRNHGRPGAD SLEHGDRLGG HAANCRTDDR RHGFVDRADP 

      1030       1040       1050       1060       1070       1080 
GGHSRHLCGR QGVRVARLAV GRRREKRRAS RFDANARPAS CGERIVTAKH IHKHCAPETA 

      1090       1100       1110       1120       1130       1140 
AIGARTILVD TVHSLRTLRS TIIKPNRRIS MYFVDNHRRA QRAGVLAATL LGAALTLQAG 

      1150       1160       1170       1180       1190       1200 
AAFAQGGTGM SDMNSMKNMQ KMSPMSGTKE VKTATATGTV TALNAADHKI TFDHGPIPAI 

      1210       1220       1230       1240 
NWPAMKMEFA VAPSVDLAKV KTGDKVNFTL SGSGGTYTVQ SIMPAH 

« Hide

References

[1]"Genome sequence of the chemolithoautotrophic bacterium Oligotropha carboxidovorans OM5T."
Paul D., Bridges S., Burgess S.C., Dandass Y., Lawrence M.L.
J. Bacteriol. 190:5531-5532(2008) [PubMed: 18539730] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 49405 / DSM 1227 / OM5 [Mississippi].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001196 Genomic DNA. Translation: ACI94872.1.
RefSeqYP_002290737.1. NC_011386.1.

3D structure databases

ProteinModelPortalB6JKC8.
ModBaseSearch...

Protein-protein interaction databases

STRINGB6JKC8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6990523.
GenomeReviewsGene locus OCAR_7777 in contig CP001196_GR.
KEGGoca:OCAR_7777.
PATRIC22809335. VBIOliCar134280_3610.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG301912.
OMAPVGIKIM.

Family and domain databases

InterProIPR001036. Acrflvin-R.
IPR021647. CusF_Ec.
IPR004763. CzcA.
[Graphical view]
PfamPF00873. ACR_tran. 1 hit.
PF11604. CusF_Ec. 1 hit.
[Graphical view]
PRINTSPR00702. ACRIFLAVINRP.
TIGRFAMsTIGR00914. 2A0601. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB6JKC8_OLICO
AccessionPrimary (citable) accession number: B6JKC8
Entry history
Integrated into UniProtKB/TrEMBL: December 16, 2008
Last sequence update: December 16, 2008
Last modified: December 14, 2011
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)