B6JJA2 (B6JJA2_OLICO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Malate synthase G RuleBase RU003572 HAMAP MF_00641
EC=2.3.3.9 RuleBase RU003572 HAMAP MF_00641

Gene names

Name:	glcB HAMAP MF_00641 EMBL ACI94496.1
Ordered Locus Names:	OCA5_c07290 EMBL AEI05452.1, OCAR_7393

Organism

Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) [Complete proteome] [HAMAP]

Taxonomic identifier

504832 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Oligotropha

Protein attributes

Sequence length	720 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Acetyl-CoA + H2O + glyoxylate = (S)-malate + CoA. SAAS SAAS006253 RuleBase RU003572 HAMAP MF_00641
Pathway	Carbohydrate metabolism; glyoxylate cycle; (S)-malate from isocitrate: step 2/2. SAAS SAAS006253 RuleBase RU003572 HAMAP MF_00641
Subunit structure	Monomer By similarity. SAAS SAAS006253 HAMAP MF_00641
Subcellular location	Cytoplasm By similarity RuleBase RU003572 HAMAP MF_00641.
Sequence similarities	Belongs to the malate synthase family. GlcB subfamily. RuleBase RU003572 HAMAP MF_00641

Ontologies

Keywords
Biological process	Glyoxylate bypass SAAS SAAS006253 RuleBase RU003572 HAMAP MF_00641 Tricarboxylic acid cycle SAAS SAAS006253 RuleBase RU003572 HAMAP MF_00641
Cellular component	Cytoplasm SAAS SAAS006253 HAMAP MF_00641
Molecular function	Acyltransferase EMBL ACI94496.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glyoxylate cycle Inferred from electronic annotation. Source: HAMAP tricarboxylic acid cycle Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	malate synthase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B6JJA2 [UniParc]. Last modified December 16, 2008. Version 1. Checksum: 048D473F89E43581	FASTA	720	78,862
	10 20 30 40 50 60 MTRTDIAGLK IAPVLADFID KEAVPGTGIS AETFWKGVAT LVKEFAPDNR ALLQKRDDLQ 70 80 90 100 110 120 AKIDEWHRAR RGKPFDLAAY TAFLKEIGYV VPEAPTRLVT TSNVDDEIAR IHGPQLVVPL 130 140 150 160 170 180 SNARYSLNAA NARWGSLYDA LYGTDAIPYD PNYKKNGYDK SRGAKVIAKA KEFLDKSIPL 190 200 210 220 230 240 ANGSHADVTG YAIENGELVA KLADGTSKLK DPAQFIGHKG SLEAPSAILF VNHRLHIEIA 250 260 270 280 290 300 IDRTGAIGKD DPAGVNDIII ESAVTTILDM EDSVAAVDAE DKVLIYRNTL GLMQGTLEAE 310 320 330 340 350 360 FDKGGKTVHR ALNADRAYTG RNGKPLTLPG RSLMLVRNVS IHMYTDAVLD ADGHEIPEGI 370 380 390 400 410 420 LDAAITALLA LHDLKARRNS RAGSVYIVKP KLHGPEEVAL TVRLFGRVEE CLSLPANTLK 430 440 450 460 470 480 IGIMDEERRT TVNLKNCIQN AAERVCFINT GFLDRTGDEI HTSIEAGPLV RKTEMKSSIW 490 500 510 520 530 540 IKAYEDSNVD TGLLNGLPGH AQIGKGMWAA PDKMADMLAQ KIAHPQAGAA TAWVPSPTAA 550 560 570 580 590 600 TLHAMHYHLV DIDARQNELK SRPRAKLADI LTIPLANSNW SSDDVKEELD NNCQSILGYV 610 620 630 640 650 660 VRWLDQGIGC SKVPDIHNVG LMEDRATLRI SSQLLANWLH HGVIEREQVM EALKRMALIV 670 680 690 700 710 720 DKQNAGDPNY KPMAPGYDGI AFQAACDLIF KGREQPNGYT EHILHARRRE IKEAARKLAS

References

[1]	"Genome sequence of the chemolithoautotrophic bacterium Oligotropha carboxidovorans OM5T." Paul D., Bridges S., Burgess S.C., Dandass Y., Lawrence M.L. J. Bacteriol. 190:5531-5532(2008) [PubMed: 18539730] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 49405 / DSM 1227 / OM5 [Mississippi].
[2]	"Complete genome sequences of the chemolithoautotrophic Oligotropha carboxidovorans strains OM4 and OM5." Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G., Meyer O. J. Bacteriol. 193:5043-5043(2011) [PubMed: 21742883] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 49405 / DSM 1227 / OM5 and OM5 EMBL AEI05452.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001196 Genomic DNA. Translation: ACI94496.1. CP002826 Genomic DNA. Translation: AEI05452.1.
RefSeq	YP_002290361.1. NC_011386.1. YP_004631693.1. NC_015684.1.
3D structure databases
ProteinModelPortal	B6JJA2.
SMR	B6JJA2. Positions 3-715.
ModBase	Search...
Protein-protein interaction databases
STRING	B6JJA2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	10845861. 6992869.
GenomeReviews	Gene locus OCAR_7393 in contig CP001196_GR.
KEGG	oca:OCAR_7393.
PATRIC	22808577. VBIOliCar134280_3232.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG350005.
OMA	PKMHGPD.
ProtClustDB	PRK02999.
Family and domain databases
HAMAP	MF_00641. Malate_synth_G. [Tree]
InterPro	IPR011076. Malate_synth-like. IPR023310. Malate_synth_G_beta_sub_dom. IPR001465. Malate_synthase. IPR006253. Malate_synthG. [Graphical view]
Gene3D	G3DSA:2.170.170.11. Malate_synth_G_beta_sub_dom. 2 hits.
KO	K01638.
PANTHER	PTHR21631:SF1. Malate_synthase. 1 hit.
Pfam	PF01274. Malate_synthase. 1 hit. [Graphical view]
SUPFAM	SSF51645. Malat_synth_like. 1 hit.
TIGRFAMs	TIGR01345. Malate_syn_G. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B6JJA2_OLICO

Accession

Primary (citable) accession number: B6JJA2

Entry history

Integrated into UniProtKB/TrEMBL:	December 16, 2008
Last sequence update:	December 16, 2008
Last modified:	January 25, 2012
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)