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Protein
Submitted name:

Adenylosuccinate lyase PurB

Gene

purB

Organism
Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciOCAR504832:GJPZ-2525-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Adenylosuccinate lyase PurBImported (EC:4.3.2.2Imported)
Gene namesi
Name:purBImported
Ordered Locus Names:OCA5_c25250Imported
OrganismiOligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5)Imported
Taxonomic identifieri504832 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeOligotropha
ProteomesiUP000007730 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi504832.OCA5_c25250.

Structurei

3D structure databases

ProteinModelPortaliB6JDV0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0015.
HOGENOMiHOG000033912.
KOiK01756.
OMAiPKNMLKN.
OrthoDBiEOG686NDB.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
InterProiIPR019468. AdenyloSucc_lyase_C.
IPR024083. Fumarase/histidase_N.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
IPR004769. Pur_lyase.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF10397. ADSL_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SMARTiSM00998. ADSL_C. 1 hit.
[Graphical view]
SUPFAMiSSF48557. SSF48557. 1 hit.
TIGRFAMsiTIGR00928. purB. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B6JDV0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIPRYSRPEM TAIWEPQTRF QIWFEIEAHA ADALAEIGTI PKDAAKKVWE
60 70 80 90 100
KAKGVTFNVE RIDEIERETK HDVIAFLTHL AEIVGPEARF VHQGMTSSDV
110 120 130 140 150
LDTCLNVQLT RAADLLIADL DRVLAALKTR AFEHKLTPVI GRSHGIHAEP
160 170 180 190 200
VTFGLKLAYA YAEFTRARAR LVAARAEVAT CAISGAVGTF AQIDPRVEAH
210 220 230 240 250
VAKAMGLTVE PISTQVIPRD RHAMFFATLG VVAASMERLA IEIRHMQRTE
260 270 280 290 300
VLEAEEFFSQ GQKGSSAMPH KRNPVLTENL TGLSRMVRAY VTPALENVAL
310 320 330 340 350
WHERDISHSS AERMMGPDAT VTLDFALNRL AGVIEKLLVY PENMQKNLDR
360 370 380 390 400
LGGLVHSQRL LLALTQKGAS REDAYKLVQR NAMPVWRGEG DFQSLLKKDE
410 420 430
DVKKYLSDKE IEEQFDLAYH FKHVDTIFNR VFGAA
Length:435
Mass (Da):48,745
Last modified:December 16, 2008 - v1
Checksum:i825CD402A602EA1A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002826 Genomic DNA. Translation: AEI07220.1.
RefSeqiWP_012562623.1. NC_015684.1.
YP_002288459.1. NC_011386.1.
YP_004633461.1. NC_015684.1.

Genome annotation databases

EnsemblBacteriaiACI92594; ACI92594; OCAR_5462.
AEI07220; AEI07220; OCA5_c25250.
KEGGioca:OCAR_5462.
ocg:OCA5_c25250.
PATRICi22804843. VBIOliCar134280_1391.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002826 Genomic DNA. Translation: AEI07220.1.
RefSeqiWP_012562623.1. NC_015684.1.
YP_002288459.1. NC_011386.1.
YP_004633461.1. NC_015684.1.

3D structure databases

ProteinModelPortaliB6JDV0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi504832.OCA5_c25250.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACI92594; ACI92594; OCAR_5462.
AEI07220; AEI07220; OCA5_c25250.
KEGGioca:OCAR_5462.
ocg:OCA5_c25250.
PATRICi22804843. VBIOliCar134280_1391.

Phylogenomic databases

eggNOGiCOG0015.
HOGENOMiHOG000033912.
KOiK01756.
OMAiPKNMLKN.
OrthoDBiEOG686NDB.

Enzyme and pathway databases

BioCyciOCAR504832:GJPZ-2525-MONOMER.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
InterProiIPR019468. AdenyloSucc_lyase_C.
IPR024083. Fumarase/histidase_N.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
IPR004769. Pur_lyase.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF10397. ADSL_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SMARTiSM00998. ADSL_C. 1 hit.
[Graphical view]
SUPFAMiSSF48557. SSF48557. 1 hit.
TIGRFAMsiTIGR00928. purB. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequences of the chemolithoautotrophic Oligotropha carboxidovorans strains OM4 and OM5."
    Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G., Meyer O.
    J. Bacteriol. 193:5043-5043(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 49405 / DSM 1227 / OM5Imported.

Entry informationi

Entry nameiB6JDV0_OLICO
AccessioniPrimary (citable) accession number: B6JDV0
Entry historyi
Integrated into UniProtKB/TrEMBL: December 16, 2008
Last sequence update: December 16, 2008
Last modified: June 24, 2015
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.