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B6JDV0 (B6JDV0_OLICO) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.3.2.2 EMBL ACI92594.1

Adenylosuccinate lyase PurB EMBL AEI07220.1
EC=4.3.2.2 EMBL AEI07220.1
Gene names
Name:purB EMBL ACI92594.1
Ordered Locus Names:OCA5_c25250 EMBL AEI07220.1, OCAR_5462 EMBL ACI92594.1
OrganismOligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) [Complete proteome] [HAMAP] EMBL ACI92594.1
Taxonomic identifier504832 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeOligotropha

Protein attributes

Sequence length435 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
B6JDV0 [UniParc].

Last modified December 16, 2008. Version 1.
Checksum: 825CD402A602EA1A

FASTA43548,745
        10         20         30         40         50         60 
MIPRYSRPEM TAIWEPQTRF QIWFEIEAHA ADALAEIGTI PKDAAKKVWE KAKGVTFNVE 

        70         80         90        100        110        120 
RIDEIERETK HDVIAFLTHL AEIVGPEARF VHQGMTSSDV LDTCLNVQLT RAADLLIADL 

       130        140        150        160        170        180 
DRVLAALKTR AFEHKLTPVI GRSHGIHAEP VTFGLKLAYA YAEFTRARAR LVAARAEVAT 

       190        200        210        220        230        240 
CAISGAVGTF AQIDPRVEAH VAKAMGLTVE PISTQVIPRD RHAMFFATLG VVAASMERLA 

       250        260        270        280        290        300 
IEIRHMQRTE VLEAEEFFSQ GQKGSSAMPH KRNPVLTENL TGLSRMVRAY VTPALENVAL 

       310        320        330        340        350        360 
WHERDISHSS AERMMGPDAT VTLDFALNRL AGVIEKLLVY PENMQKNLDR LGGLVHSQRL 

       370        380        390        400        410        420 
LLALTQKGAS REDAYKLVQR NAMPVWRGEG DFQSLLKKDE DVKKYLSDKE IEEQFDLAYH 

       430 
FKHVDTIFNR VFGAA 

« Hide

References

[1]"Genome sequence of the chemolithoautotrophic bacterium Oligotropha carboxidovorans OM5T."
Paul D., Bridges S., Burgess S.C., Dandass Y., Lawrence M.L.
J. Bacteriol. 190:5531-5532(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 49405 / DSM 1227 / OM5 [Mississippi] and OM5 EMBL ACI92594.1.
[2]"Complete Genome Sequences of the Chemolithoautotrophic Oligotropha carboxidovorans Strains OM4 and OM5."
Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G., Meyer O.
J. Bacteriol. 193:5043-5043(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 49405 / DSM 1227 / OM5 and OM5 EMBL AEI07220.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001196 Genomic DNA. Translation: ACI92594.1.
CP002826 Genomic DNA. Translation: AEI07220.1.
RefSeqYP_002288459.1. NC_011386.1.
YP_004633461.1. NC_015684.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING504832.OCAR_5462.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACI92594; ACI92594; OCAR_5462.
AEI07220; AEI07220; OCA5_c25250.
GeneID10847657.
6991449.
KEGGoca:OCAR_5462.
ocg:OCA5_c25250.
PATRIC22804843. VBIOliCar134280_1391.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0015.
HOGENOMHOG000033912.
KOK01756.
OMAEMKYVWS.
OrthoDBEOG686NDB.

Enzyme and pathway databases

BioCycOCAR504832:GJPZ-2525-MONOMER.

Family and domain databases

Gene3D1.10.275.10. 1 hit.
InterProIPR019468. AdenyloSucc_lyase_C.
IPR024083. Fumarase/histidase_N.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
IPR004769. Pur_lyase.
[Graphical view]
PANTHERPTHR11444. PTHR11444. 1 hit.
PfamPF10397. ADSL_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSPR00149. FUMRATELYASE.
SMARTSM00998. ADSL_C. 1 hit.
[Graphical view]
SUPFAMSSF48557. SSF48557. 1 hit.
TIGRFAMsTIGR00928. purB. 1 hit.
PROSITEPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB6JDV0_OLICO
AccessionPrimary (citable) accession number: B6JDV0
Entry history
Integrated into UniProtKB/TrEMBL: December 16, 2008
Last sequence update: December 16, 2008
Last modified: July 9, 2014
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)