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B6JDV0

- B6JDV0_OLICO

UniProt

B6JDV0 - B6JDV0_OLICO

Protein

Adenylosuccinate lyase

Gene

purB

Organism
Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 46 (01 Oct 2014)
      Sequence version 1 (16 Dec 2008)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate = fumarate + 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide.UniRule annotation
    N(6)-(1,2-dicarboxyethyl)AMP = fumarate + AMP.UniRule annotation

    Pathwayi

    GO - Molecular functioni

    1. (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity Source: UniProtKB-EC
    2. N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity Source: UniProtKB-EC

    GO - Biological processi

    1. purine ribonucleotide biosynthetic process Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotationImported

    Keywords - Biological processi

    Purine biosynthesisUniRule annotation

    Enzyme and pathway databases

    BioCyciOCAR504832:GJPZ-2525-MONOMER.
    UniPathwayiUPA00074; UER00132.
    UPA00075; UER00336.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Adenylosuccinate lyaseUniRule annotation (EC:4.3.2.2UniRule annotation)
    Short name:
    ASLUniRule annotation
    Alternative name(s):
    AdenylosuccinaseUniRule annotation
    Gene namesi
    Name:purBImported
    Ordered Locus Names:OCA5_c25250Imported, OCAR_5462Imported
    OrganismiOligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5)Imported
    Taxonomic identifieri504832 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeOligotropha
    ProteomesiUP000007730: Chromosome, UP000001678: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi504832.OCAR_5462.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0015.
    HOGENOMiHOG000033912.
    KOiK01756.
    OMAiEMKYVWS.
    OrthoDBiEOG686NDB.

    Family and domain databases

    Gene3Di1.10.275.10. 1 hit.
    InterProiIPR019468. AdenyloSucc_lyase_C.
    IPR024083. Fumarase/histidase_N.
    IPR020557. Fumarate_lyase_CS.
    IPR000362. Fumarate_lyase_fam.
    IPR022761. Fumarate_lyase_N.
    IPR008948. L-Aspartase-like.
    IPR004769. Pur_lyase.
    [Graphical view]
    PANTHERiPTHR11444. PTHR11444. 1 hit.
    PfamiPF10397. ADSL_C. 1 hit.
    PF00206. Lyase_1. 1 hit.
    [Graphical view]
    PRINTSiPR00149. FUMRATELYASE.
    SMARTiSM00998. ADSL_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF48557. SSF48557. 1 hit.
    TIGRFAMsiTIGR00928. purB. 1 hit.
    PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B6JDV0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MIPRYSRPEM TAIWEPQTRF QIWFEIEAHA ADALAEIGTI PKDAAKKVWE    50
    KAKGVTFNVE RIDEIERETK HDVIAFLTHL AEIVGPEARF VHQGMTSSDV 100
    LDTCLNVQLT RAADLLIADL DRVLAALKTR AFEHKLTPVI GRSHGIHAEP 150
    VTFGLKLAYA YAEFTRARAR LVAARAEVAT CAISGAVGTF AQIDPRVEAH 200
    VAKAMGLTVE PISTQVIPRD RHAMFFATLG VVAASMERLA IEIRHMQRTE 250
    VLEAEEFFSQ GQKGSSAMPH KRNPVLTENL TGLSRMVRAY VTPALENVAL 300
    WHERDISHSS AERMMGPDAT VTLDFALNRL AGVIEKLLVY PENMQKNLDR 350
    LGGLVHSQRL LLALTQKGAS REDAYKLVQR NAMPVWRGEG DFQSLLKKDE 400
    DVKKYLSDKE IEEQFDLAYH FKHVDTIFNR VFGAA 435
    Length:435
    Mass (Da):48,745
    Last modified:December 16, 2008 - v1
    Checksum:i825CD402A602EA1A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001196 Genomic DNA. Translation: ACI92594.1.
    CP002826 Genomic DNA. Translation: AEI07220.1.
    RefSeqiYP_002288459.1. NC_011386.1.
    YP_004633461.1. NC_015684.1.

    Genome annotation databases

    EnsemblBacteriaiACI92594; ACI92594; OCAR_5462.
    AEI07220; AEI07220; OCA5_c25250.
    GeneIDi10847657.
    6991449.
    KEGGioca:OCAR_5462.
    ocg:OCA5_c25250.
    PATRICi22804843. VBIOliCar134280_1391.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001196 Genomic DNA. Translation: ACI92594.1 .
    CP002826 Genomic DNA. Translation: AEI07220.1 .
    RefSeqi YP_002288459.1. NC_011386.1.
    YP_004633461.1. NC_015684.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 504832.OCAR_5462.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACI92594 ; ACI92594 ; OCAR_5462 .
    AEI07220 ; AEI07220 ; OCA5_c25250 .
    GeneIDi 10847657.
    6991449.
    KEGGi oca:OCAR_5462.
    ocg:OCA5_c25250.
    PATRICi 22804843. VBIOliCar134280_1391.

    Phylogenomic databases

    eggNOGi COG0015.
    HOGENOMi HOG000033912.
    KOi K01756.
    OMAi EMKYVWS.
    OrthoDBi EOG686NDB.

    Enzyme and pathway databases

    UniPathwayi UPA00074 ; UER00132 .
    UPA00075 ; UER00336 .
    BioCyci OCAR504832:GJPZ-2525-MONOMER.

    Family and domain databases

    Gene3Di 1.10.275.10. 1 hit.
    InterProi IPR019468. AdenyloSucc_lyase_C.
    IPR024083. Fumarase/histidase_N.
    IPR020557. Fumarate_lyase_CS.
    IPR000362. Fumarate_lyase_fam.
    IPR022761. Fumarate_lyase_N.
    IPR008948. L-Aspartase-like.
    IPR004769. Pur_lyase.
    [Graphical view ]
    PANTHERi PTHR11444. PTHR11444. 1 hit.
    Pfami PF10397. ADSL_C. 1 hit.
    PF00206. Lyase_1. 1 hit.
    [Graphical view ]
    PRINTSi PR00149. FUMRATELYASE.
    SMARTi SM00998. ADSL_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF48557. SSF48557. 1 hit.
    TIGRFAMsi TIGR00928. purB. 1 hit.
    PROSITEi PS00163. FUMARATE_LYASES. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the chemolithoautotrophic bacterium Oligotropha carboxidovorans OM5T."
      Paul D., Bridges S., Burgess S.C., Dandass Y., Lawrence M.L.
      J. Bacteriol. 190:5531-5532(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 49405 / DSM 1227 / OM5 and OM5Imported.
    2. "Complete genome sequences of the chemolithoautotrophic Oligotropha carboxidovorans strains OM4 and OM5."
      Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G., Meyer O.
      J. Bacteriol. 193:5043-5043(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 49405 / DSM 1227 / OM5Imported, ATCC 49405 / DSM 1227 / OM5 [Mississippi]Imported and OM5Imported.

    Entry informationi

    Entry nameiB6JDV0_OLICO
    AccessioniPrimary (citable) accession number: B6JDV0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 16, 2008
    Last sequence update: December 16, 2008
    Last modified: October 1, 2014
    This is version 46 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3