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B6JDV0

- B6JDV0_OLICO

UniProt

B6JDV0 - B6JDV0_OLICO

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Protein
Submitted name: Adenylosuccinate lyase
Gene
purB, OCA5_c25250, OCAR_5462
Organism
Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity Source: UniProtKB-EC
  2. N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

  1. purine ribonucleotide biosynthetic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciOCAR504832:GJPZ-2525-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Adenylosuccinate lyaseImported (EC:4.3.2.2Imported)
Submitted name:
Adenylosuccinate lyase PurBImported (EC:4.3.2.2Imported)
Gene namesi
Name:purBImported
Ordered Locus Names:OCA5_c25250Imported, OCAR_5462Imported
OrganismiOligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5)Imported
Taxonomic identifieri504832 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeOligotropha
ProteomesiUP000007730: Chromosome, UP000001678: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi504832.OCAR_5462.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0015.
HOGENOMiHOG000033912.
KOiK01756.
OMAiEMKYVWS.
OrthoDBiEOG686NDB.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
InterProiIPR019468. AdenyloSucc_lyase_C.
IPR024083. Fumarase/histidase_N.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
IPR004769. Pur_lyase.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF10397. ADSL_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SMARTiSM00998. ADSL_C. 1 hit.
[Graphical view]
SUPFAMiSSF48557. SSF48557. 1 hit.
TIGRFAMsiTIGR00928. purB. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B6JDV0-1 [UniParc]FASTAAdd to Basket

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MIPRYSRPEM TAIWEPQTRF QIWFEIEAHA ADALAEIGTI PKDAAKKVWE    50
KAKGVTFNVE RIDEIERETK HDVIAFLTHL AEIVGPEARF VHQGMTSSDV 100
LDTCLNVQLT RAADLLIADL DRVLAALKTR AFEHKLTPVI GRSHGIHAEP 150
VTFGLKLAYA YAEFTRARAR LVAARAEVAT CAISGAVGTF AQIDPRVEAH 200
VAKAMGLTVE PISTQVIPRD RHAMFFATLG VVAASMERLA IEIRHMQRTE 250
VLEAEEFFSQ GQKGSSAMPH KRNPVLTENL TGLSRMVRAY VTPALENVAL 300
WHERDISHSS AERMMGPDAT VTLDFALNRL AGVIEKLLVY PENMQKNLDR 350
LGGLVHSQRL LLALTQKGAS REDAYKLVQR NAMPVWRGEG DFQSLLKKDE 400
DVKKYLSDKE IEEQFDLAYH FKHVDTIFNR VFGAA 435
Length:435
Mass (Da):48,745
Last modified:December 16, 2008 - v1
Checksum:i825CD402A602EA1A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001196 Genomic DNA. Translation: ACI92594.1.
CP002826 Genomic DNA. Translation: AEI07220.1.
RefSeqiYP_002288459.1. NC_011386.1.
YP_004633461.1. NC_015684.1.

Genome annotation databases

EnsemblBacteriaiACI92594; ACI92594; OCAR_5462.
AEI07220; AEI07220; OCA5_c25250.
GeneIDi10847657.
6991449.
KEGGioca:OCAR_5462.
ocg:OCA5_c25250.
PATRICi22804843. VBIOliCar134280_1391.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001196 Genomic DNA. Translation: ACI92594.1 .
CP002826 Genomic DNA. Translation: AEI07220.1 .
RefSeqi YP_002288459.1. NC_011386.1.
YP_004633461.1. NC_015684.1.

3D structure databases

ModBasei Search...

Protein-protein interaction databases

STRINGi 504832.OCAR_5462.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACI92594 ; ACI92594 ; OCAR_5462 .
AEI07220 ; AEI07220 ; OCA5_c25250 .
GeneIDi 10847657.
6991449.
KEGGi oca:OCAR_5462.
ocg:OCA5_c25250.
PATRICi 22804843. VBIOliCar134280_1391.

Phylogenomic databases

eggNOGi COG0015.
HOGENOMi HOG000033912.
KOi K01756.
OMAi EMKYVWS.
OrthoDBi EOG686NDB.

Enzyme and pathway databases

BioCyci OCAR504832:GJPZ-2525-MONOMER.

Family and domain databases

Gene3Di 1.10.275.10. 1 hit.
InterProi IPR019468. AdenyloSucc_lyase_C.
IPR024083. Fumarase/histidase_N.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
IPR004769. Pur_lyase.
[Graphical view ]
PANTHERi PTHR11444. PTHR11444. 1 hit.
Pfami PF10397. ADSL_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view ]
PRINTSi PR00149. FUMRATELYASE.
SMARTi SM00998. ADSL_C. 1 hit.
[Graphical view ]
SUPFAMi SSF48557. SSF48557. 1 hit.
TIGRFAMsi TIGR00928. purB. 1 hit.
PROSITEi PS00163. FUMARATE_LYASES. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of the chemolithoautotrophic bacterium Oligotropha carboxidovorans OM5T."
    Paul D., Bridges S., Burgess S.C., Dandass Y., Lawrence M.L.
    J. Bacteriol. 190:5531-5532(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 49405 / DSM 1227 / OM5 [Mississippi] and OM5Imported.
  2. "Complete genome sequences of the chemolithoautotrophic Oligotropha carboxidovorans strains OM4 and OM5."
    Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G., Meyer O.
    J. Bacteriol. 193:5043-5043(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 49405 / DSM 1227 / OM5 and OM5Imported.

Entry informationi

Entry nameiB6JDV0_OLICO
AccessioniPrimary (citable) accession number: B6JDV0
Entry historyi
Integrated into UniProtKB/TrEMBL: December 16, 2008
Last sequence update: December 16, 2008
Last modified: September 3, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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