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B6JDU7 (B6JDU7_OLICO) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Glutamate racemase HAMAP MF_00258
EC=5.1.1.3 HAMAP MF_00258
Gene names
Name:murI HAMAP MF_00258 EMBL ACI92591.1
Ordered Locus Names:OCA5_c25280 EMBL AEI07223.1, OCAR_5459
OrganismOligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) [Complete proteome] [HAMAP]
Taxonomic identifier504832 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Oligotropha

Protein attributes

Sequence length264 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Provides the (R)-glutamate required for cell wall biosynthesis By similarity. SAAS SAAS015942 HAMAP MF_00258

Catalytic activity

L-glutamate = D-glutamate. SAAS SAAS015942 HAMAP MF_00258

Pathway

Cell wall biogenesis; peptidoglycan biosynthesis. SAAS SAAS015942 HAMAP MF_00258

Sequence similarities

Belongs to the aspartate/glutamate racemases family. HAMAP MF_00258

Sequences

Sequence LengthMass (Da)Tools
B6JDU7 [UniParc].

Last modified December 16, 2008. Version 1.
Checksum: 752400F2DACEEEA0

FASTA26428,413
        10         20         30         40         50         60 
MSIPRAILVF DSGLGGLTVL REIAAARPDA AYTYVADDAF FPYGQHEEDE IIARVVPLIG 

        70         80         90        100        110        120 
DLIDRHRPDL VVIACNTAST LVMDHLRKAY SVPFVGTVPA IKPACAASKT KKVSVLGTRG 

       130        140        150        160        170        180 
TVKREYTRTL IRNFAQGCDV TLVGAENLAS LAERALRGEA ISDDAVRAEI AACFVEDSPR 

       190        200        210        220        230        240 
TDTVVLACTH YPLLLEQIQR IAPWPVAWID PAPAIARRVV SLIGPQADRS AAPAKFLFTS 

       250        260 
GRAPTATLET ALRPFFGADA LDFA

« Hide

References

[1]"Genome sequence of the chemolithoautotrophic bacterium Oligotropha carboxidovorans OM5T."
Paul D., Bridges S., Burgess S.C., Dandass Y., Lawrence M.L.
J. Bacteriol. 190:5531-5532(2008) [PubMed: 18539730] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 49405 / DSM 1227 / OM5 [Mississippi].
[2]"Complete genome sequences of the chemolithoautotrophic Oligotropha carboxidovorans strains OM4 and OM5."
Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G., Meyer O.
J. Bacteriol. 193:5043-5043(2011) [PubMed: 21742883] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 49405 / DSM 1227 / OM5 and OM5 EMBL AEI07223.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001196 Genomic DNA. Translation: ACI92591.1.
CP002826 Genomic DNA. Translation: AEI07223.1.
RefSeqYP_002288456.1. NC_011386.1.
YP_004633464.1. NC_015684.1.

3D structure databases

ProteinModelPortalB6JDU7.
ModBaseSearch...

Protein-protein interaction databases

STRINGB6JDU7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID10847660.
6991446.
GenomeReviewsGene locus OCAR_5459 in contig CP001196_GR.
KEGGoca:OCAR_5459.
PATRIC22804837. VBIOliCar134280_1388.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG645102.
OMAARTNAMI.
ProtClustDBPRK00865.

Family and domain databases

HAMAPMF_00258. Glu_racemase.
[Tree]
InterProIPR015942. Asp/Glu/hydantoin_racemase.
IPR001920. Asp/Glu_race.
IPR018187. Asp/Glu_racemase_AS.
IPR004391. Glu_race.
[Graphical view]
Gene3DG3DSA:3.40.50.1860. Asp/Glu_race. 1 hit.
KOK01776.
PANTHERPTHR21198. PTHR21198. 1 hit.
PfamPF01177. Asp_Glu_race. 1 hit.
[Graphical view]
SUPFAMSSF53681. Asp/Glu_race. 2 hits.
TIGRFAMsTIGR00067. Glut_race. 1 hit.
PROSITEPS00923. ASP_GLU_RACEMASE_1. 1 hit.
PS00924. ASP_GLU_RACEMASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB6JDU7_OLICO
AccessionPrimary (citable) accession number: B6JDU7
Entry history
Integrated into UniProtKB/TrEMBL: December 16, 2008
Last sequence update: December 16, 2008
Last modified: January 25, 2012
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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