B6JDB9 (B6JDB9_OLICO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Cytochrome c oxidase assembly protein CtaG HAMAP MF_00155

Gene names

Name:	coxG EMBL AEI07936.1
Synonyms:	ctaG HAMAP MF_00155
Ordered Locus Names:	OCA5_c32600 EMBL AEI07936.1, OCAR_4689

Organism

Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) [Complete proteome] [HAMAP]

Taxonomic identifier

504832 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Oligotropha

Protein attributes

Sequence length	205 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I By similarity. HAMAP MF_00155
Subcellular location	Cell inner membrane; Single-pass type II membrane protein; Periplasmic side By similarity HAMAP MF_00155.
Sequence similarities	Belongs to the COX11/CtaG family. HAMAP MF_00155

Ontologies

Keywords
Cellular component	Cell inner membrane HAMAP MF_00155 Cell membrane Membrane
Domain	Signal-anchor HAMAP MF_00155 Transmembrane Transmembrane helix HAMAP MF_00155
Ligand	Copper HAMAP MF_00155
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	respiratory chain complex IV assembly Inferred from electronic annotation. Source: HAMAP
Cellular component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	copper ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Regions
	Topological domain	1 – 18	18	Cytoplasmic By similarity HAMAP MF_00155
	Transmembrane	19 – 41	23	Helical; Signal-anchor for type II membrane protein; By similarity HAMAP MF_00155
	Topological domain	42 – 205	164	Periplasmic By similarity HAMAP MF_00155

Sequences

	Sequence		Length	Mass (Da)
	B6JDB9 [UniParc]. Last modified December 16, 2008. Version 1. Checksum: 2B78B075C5B15A70	FASTA	205	22,432
	10 20 30 40 50 60 MSKETPSSPE RPTKPRHSRD AVIAGVCGLV VAFMIGAAYA AVPFYDWFCR ATGFNGTPQV 70 80 90 100 110 120 ASSAPAHATD REITVRFDSN ISGGLPWKFV PEQDEIRTRI GQVETVYYKV INQSARKTTG 130 140 150 160 170 180 QAGYNVAPLT AGAYFTKINC FCFTEQTMEP GETRDMAVVF YVDPSMVEDT NQASVSTITL 190 200 SYTFYPVKNP ETKPVAASER DGGRS

References

[1]	"Genome sequence of the chemolithoautotrophic bacterium Oligotropha carboxidovorans OM5T." Paul D., Bridges S., Burgess S.C., Dandass Y., Lawrence M.L. J. Bacteriol. 190:5531-5532(2008) [PubMed: 18539730] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 49405 / DSM 1227 / OM5 [Mississippi].
[2]	"Complete genome sequences of the chemolithoautotrophic Oligotropha carboxidovorans strains OM4 and OM5." Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G., Meyer O. J. Bacteriol. 193:5043-5043(2011) [PubMed: 21742883] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 49405 / DSM 1227 / OM5 and OM5 EMBL AEI07936.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001196 Genomic DNA. Translation: ACI91831.1. CP002826 Genomic DNA. Translation: AEI07936.1.
RefSeq	YP_002287696.1. NC_011386.1. YP_004634177.1. NC_015684.1.
3D structure databases
ProteinModelPortal	B6JDB9.
ModBase	Search...
Protein-protein interaction databases
STRING	B6JDB9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	10848390. 6993439.
GenomeReviews	Gene locus OCAR_4689 in contig CP001196_GR.
KEGG	oca:OCAR_4689.
PATRIC	22803351. VBIOliCar134280_0658.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG525908.
OMA	KLIFYRA.
ProtClustDB	PRK05089.
Family and domain databases
HAMAP	MF_00155. CtaG. [Tree]
InterPro	IPR023471. CtaG/Cox11_dom. IPR007533. Cyt_c_oxidase_assmbl_CtaG. [Graphical view]
Gene3D	G3DSA:2.60.370.10. CtaG_Cox11. 1 hit.
KO	K02258.
PANTHER	PTHR21320. CtaG_Cox11. 1 hit.
Pfam	PF04442. CtaG_Cox11. 1 hit. [Graphical view]
PIRSF	PIRSF005413. COX11. 1 hit.
SUPFAM	SSF110111. CtaG_Cox11. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B6JDB9_OLICO

Accession

Primary (citable) accession number: B6JDB9

Entry history

Integrated into UniProtKB/TrEMBL:	December 16, 2008
Last sequence update:	December 16, 2008
Last modified:	January 25, 2012
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)