Skip Header

Contribute Send feedback
Read comments (?) or add your own

B6JD70 (APAG_OLICO) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Protein ApaG
Gene names
Name:apaG
Ordered Locus Names:OCAR_4657, OCA5_c32910
OrganismOligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) [Complete proteome] [HAMAP]
Taxonomic identifier504832 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeOligotropha

Protein attributes

Sequence length130 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Contains 1 apaG domain.

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 130130Protein ApaG HAMAP MF_00791
PRO_1000133799

Regions

Domain3 – 127125ApaG

Sequences

Sequence LengthMass (Da)Tools
B6JD70 [UniParc].

Last modified December 16, 2008. Version 1.
Checksum: FA55255FC756709D

FASTA13014,563
        10         20         30         40         50         60 
MYRAVTRQIE VLVEPEFLPE RSSPEKQQFF WAYSITIVNG GPDSVQLKTR HWVITDGFGQ 

        70         80         90        100        110        120 
QQEVRGEGVV GEQPVIGPGE RYEYTSGVPL TTSSGFMTGS YQMVTEDGEA FDLAIPLFSL 

       130 
DSPDIRRTLN 

« Hide

References

[1]"Genome sequence of the chemolithoautotrophic bacterium Oligotropha carboxidovorans OM5T."
Paul D., Bridges S., Burgess S.C., Dandass Y., Lawrence M.L.
J. Bacteriol. 190:5531-5532(2008) [PubMed: 18539730] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 49405 / DSM 1227 / OM5.
[2]"Complete genome sequences of the chemolithoautotrophic Oligotropha carboxidovorans strains OM4 and OM5."
Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G., Meyer O.
J. Bacteriol. 193:5043-5043(2011) [PubMed: 21742883] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 49405 / DSM 1227 / OM5.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001196 Genomic DNA. Translation: ACI91800.1.
CP002826 Genomic DNA. Translation: AEI07966.1.
RefSeqYP_002287665.1. NC_011386.1.
YP_004634207.1. NC_015684.1.

3D structure databases

ProteinModelPortalB6JD70.
ModBaseSearch...

Protein-protein interaction databases

STRINGB6JD70.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID10848421.
6993408.
GenomeReviewsGene locus OCAR_4657 in contig CP001196_GR.
KEGGoca:OCAR_4657.
PATRIC22803287. VBIOliCar134280_0627.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG746214.
OMASRHWVIT.
ProtClustDBPRK05461.

Family and domain databases

HAMAPMF_00791. ApaG.
[Tree]
InterProIPR007474. ApaG_domain.
IPR023065. Uncharacterised_ApaG.
[Graphical view]
Gene3DG3DSA:2.60.40.1470. ApaG. 1 hit.
KOK06195.
PfamPF04379. DUF525. 1 hit.
[Graphical view]
SUPFAMSSF110069. ApaG. 1 hit.
PROSITEPS51087. APAG. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameAPAG_OLICO
AccessionPrimary (citable) accession number: B6JD70
Secondary accession number(s): F8BSN8
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: December 16, 2008
Last modified: January 25, 2012
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families