B6JD70 (APAG_OLICO) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 21.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Protein ApaG | ||||
| Gene names |
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| Organism | Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 504832 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Oligotropha |
Protein attributes
| Sequence length | 130 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Sequence similarities | Contains 1 apaG domain. |
Ontologies
| Keywords | |
|---|---|
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| None. [Check GOA] | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 130 | 130 | Protein ApaG HAMAP MF_00791 | PRO_1000133799 | |||||
Regions | |||||||||
| Domain | 3 – 127 | 125 | ApaG | ||||||
Sequences
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References
| [1] | "Genome sequence of the chemolithoautotrophic bacterium Oligotropha carboxidovorans OM5T." Paul D., Bridges S., Burgess S.C., Dandass Y., Lawrence M.L. J. Bacteriol. 190:5531-5532(2008) [PubMed: 18539730] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 49405 / DSM 1227 / OM5. |
| [2] | "Complete genome sequences of the chemolithoautotrophic Oligotropha carboxidovorans strains OM4 and OM5." Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G., Meyer O. J. Bacteriol. 193:5043-5043(2011) [PubMed: 21742883] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 49405 / DSM 1227 / OM5. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP001196 Genomic DNA. Translation: ACI91800.1. CP002826 Genomic DNA. Translation: AEI07966.1. |
| RefSeq | YP_002287665.1. NC_011386.1. YP_004634207.1. NC_015684.1. |
3D structure databases | |
| ProteinModelPortal | B6JD70. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | B6JD70. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 10848421. 6993408. |
| GenomeReviews | Gene locus OCAR_4657 in contig CP001196_GR. |
| KEGG | oca:OCAR_4657. |
| PATRIC | 22803287. VBIOliCar134280_0627. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | HBG746214. |
| OMA | SRHWVIT. |
| ProtClustDB | PRK05461. |
Family and domain databases | |
| HAMAP | MF_00791. ApaG. [Tree] |
| InterPro | IPR007474. ApaG_domain. IPR023065. Uncharacterised_ApaG. [Graphical view] |
| Gene3D | G3DSA:2.60.40.1470. ApaG. 1 hit. |
| KO | K06195. |
| Pfam | PF04379. DUF525. 1 hit. [Graphical view] |
| SUPFAM | SSF110069. ApaG. 1 hit. |
| PROSITE | PS51087. APAG. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | APAG_OLICO | ||||||||
| Accession | Primary (citable) accession number: B6JD70 Secondary accession number(s): F8BSN8 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Prokaryotic Protein Annotation Program | ||||||||
Relevant documents
| SIMILARITY comments Index of protein domains and families |

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