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B6JCP1

- TRPF_OLICO

UniProt

B6JCP1 - TRPF_OLICO

Protein

N-(5'-phosphoribosyl)anthranilate isomerase

Gene

trpF

Organism
Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 37 (01 Oct 2014)
      Sequence version 1 (16 Dec 2008)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    N-(5-phospho-beta-D-ribosyl)anthranilate = 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate.UniRule annotation

    Pathwayi

    GO - Molecular functioni

    1. phosphoribosylanthranilate isomerase activity Source: UniProtKB-EC

    GO - Biological processi

    1. tryptophan biosynthetic process Source: UniProtKB-UniPathway

    Keywords - Molecular functioni

    Isomerase

    Keywords - Biological processi

    Amino-acid biosynthesis, Aromatic amino acid biosynthesis, Tryptophan biosynthesis

    Enzyme and pathway databases

    BioCyciOCAR504832:GJPZ-58-MONOMER.
    UniPathwayiUPA00035; UER00042.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    N-(5'-phosphoribosyl)anthranilate isomeraseUniRule annotation (EC:5.3.1.24UniRule annotation)
    Short name:
    PRAIUniRule annotation
    Gene namesi
    Name:trpFUniRule annotation
    Ordered Locus Names:OCAR_4476, OCA5_c00580
    OrganismiOligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5)
    Taxonomic identifieri504832 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeOligotropha
    ProteomesiUP000001678: Chromosome, UP000007730: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 234234N-(5'-phosphoribosyl)anthranilate isomerasePRO_1000095929Add
    BLAST

    Proteomic databases

    PRIDEiB6JCP1.

    Interactioni

    Protein-protein interaction databases

    STRINGi504832.OCAR_4476.

    Structurei

    3D structure databases

    ProteinModelPortaliB6JCP1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the TrpF family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0135.
    HOGENOMiHOG000161598.
    KOiK01817.
    OMAiDILQLHG.
    OrthoDBiEOG6N94DF.

    Family and domain databases

    Gene3Di3.20.20.70. 1 hit.
    HAMAPiMF_00135. PRAI.
    InterProiIPR013785. Aldolase_TIM.
    IPR001240. PRAI_dom.
    IPR011060. RibuloseP-bd_barrel.
    [Graphical view]
    PfamiPF00697. PRAI. 1 hit.
    [Graphical view]
    SUPFAMiSSF51366. SSF51366. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B6JCP1-1 [UniParc]FASTAAdd to Basket

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    MSLIVKICGL SEPETLEAAL EAGADMVGLV FFPPSPRNVD LARAAELAAR    50
    ARGRAEIAAL TVDADARLLD AIAREVRPDW LQLHGNEPPE AVAALRETYD 100
    ARVMKAVALA TRADLAKVAP YVSVADRILF DARAPKDATR PGGLGVPFDW 150
    RILEGADPGL PFVLSGGLHA DNLSEALALV RPHGVDVSSG VERTIGVKDA 200
    DMIRAFIRAA RAASSSPRPV DGESPAFQRS EKAG 234
    Length:234
    Mass (Da):24,731
    Last modified:December 16, 2008 - v1
    Checksum:i5268607F728ED3C9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001196 Genomic DNA. Translation: ACI91621.1.
    CP002826 Genomic DNA. Translation: AEI04792.1.
    RefSeqiWP_012561652.1. NC_015684.1.
    YP_002287486.1. NC_011386.1.
    YP_004631033.1. NC_015684.1.

    Genome annotation databases

    EnsemblBacteriaiACI91621; ACI91621; OCAR_4476.
    AEI04792; AEI04792; OCA5_c00580.
    GeneIDi10845190.
    6993229.
    KEGGioca:OCAR_4476.
    ocg:OCA5_c00580.
    PATRICi22802933. VBIOliCar134280_0452.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001196 Genomic DNA. Translation: ACI91621.1 .
    CP002826 Genomic DNA. Translation: AEI04792.1 .
    RefSeqi WP_012561652.1. NC_015684.1.
    YP_002287486.1. NC_011386.1.
    YP_004631033.1. NC_015684.1.

    3D structure databases

    ProteinModelPortali B6JCP1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 504832.OCAR_4476.

    Proteomic databases

    PRIDEi B6JCP1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACI91621 ; ACI91621 ; OCAR_4476 .
    AEI04792 ; AEI04792 ; OCA5_c00580 .
    GeneIDi 10845190.
    6993229.
    KEGGi oca:OCAR_4476.
    ocg:OCA5_c00580.
    PATRICi 22802933. VBIOliCar134280_0452.

    Phylogenomic databases

    eggNOGi COG0135.
    HOGENOMi HOG000161598.
    KOi K01817.
    OMAi DILQLHG.
    OrthoDBi EOG6N94DF.

    Enzyme and pathway databases

    UniPathwayi UPA00035 ; UER00042 .
    BioCyci OCAR504832:GJPZ-58-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.70. 1 hit.
    HAMAPi MF_00135. PRAI.
    InterProi IPR013785. Aldolase_TIM.
    IPR001240. PRAI_dom.
    IPR011060. RibuloseP-bd_barrel.
    [Graphical view ]
    Pfami PF00697. PRAI. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51366. SSF51366. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the chemolithoautotrophic bacterium Oligotropha carboxidovorans OM5T."
      Paul D., Bridges S., Burgess S.C., Dandass Y., Lawrence M.L.
      J. Bacteriol. 190:5531-5532(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 49405 / DSM 1227 / OM5.
    2. "Complete genome sequences of the chemolithoautotrophic Oligotropha carboxidovorans strains OM4 and OM5."
      Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G., Meyer O.
      J. Bacteriol. 193:5043-5043(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 49405 / DSM 1227 / OM5.

    Entry informationi

    Entry nameiTRPF_OLICO
    AccessioniPrimary (citable) accession number: B6JCP1
    Secondary accession number(s): F8C093
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 24, 2009
    Last sequence update: December 16, 2008
    Last modified: October 1, 2014
    This is version 37 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3