Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

B6JCP1

- TRPF_OLICO

UniProt

B6JCP1 - TRPF_OLICO

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

N-(5'-phosphoribosyl)anthranilate isomerase

Gene

trpF

Organism
Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

N-(5-phospho-beta-D-ribosyl)anthranilate = 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate.UniRule annotation

Pathwayi

GO - Molecular functioni

  1. phosphoribosylanthranilate isomerase activity Source: UniProtKB-EC

GO - Biological processi

  1. tryptophan biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

Isomerase

Keywords - Biological processi

Amino-acid biosynthesis, Aromatic amino acid biosynthesis, Tryptophan biosynthesis

Enzyme and pathway databases

BioCyciOCAR504832:GJPZ-58-MONOMER.
UniPathwayiUPA00035; UER00042.

Names & Taxonomyi

Protein namesi
Recommended name:
N-(5'-phosphoribosyl)anthranilate isomeraseUniRule annotation (EC:5.3.1.24UniRule annotation)
Short name:
PRAIUniRule annotation
Gene namesi
Name:trpFUniRule annotation
Ordered Locus Names:OCAR_4476, OCA5_c00580
OrganismiOligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5)
Taxonomic identifieri504832 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeOligotropha
ProteomesiUP000001678: Chromosome, UP000007730: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 234234N-(5'-phosphoribosyl)anthranilate isomerasePRO_1000095929Add
BLAST

Proteomic databases

PRIDEiB6JCP1.

Interactioni

Protein-protein interaction databases

STRINGi504832.OCAR_4476.

Structurei

3D structure databases

ProteinModelPortaliB6JCP1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the TrpF family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0135.
HOGENOMiHOG000161598.
KOiK01817.
OMAiDILQLHG.
OrthoDBiEOG6N94DF.

Family and domain databases

Gene3Di3.20.20.70. 1 hit.
HAMAPiMF_00135. PRAI.
InterProiIPR013785. Aldolase_TIM.
IPR001240. PRAI_dom.
IPR011060. RibuloseP-bd_barrel.
[Graphical view]
PfamiPF00697. PRAI. 1 hit.
[Graphical view]
SUPFAMiSSF51366. SSF51366. 1 hit.

Sequencei

Sequence statusi: Complete.

B6JCP1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSLIVKICGL SEPETLEAAL EAGADMVGLV FFPPSPRNVD LARAAELAAR
60 70 80 90 100
ARGRAEIAAL TVDADARLLD AIAREVRPDW LQLHGNEPPE AVAALRETYD
110 120 130 140 150
ARVMKAVALA TRADLAKVAP YVSVADRILF DARAPKDATR PGGLGVPFDW
160 170 180 190 200
RILEGADPGL PFVLSGGLHA DNLSEALALV RPHGVDVSSG VERTIGVKDA
210 220 230
DMIRAFIRAA RAASSSPRPV DGESPAFQRS EKAG
Length:234
Mass (Da):24,731
Last modified:December 16, 2008 - v1
Checksum:i5268607F728ED3C9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001196 Genomic DNA. Translation: ACI91621.1.
CP002826 Genomic DNA. Translation: AEI04792.1.
RefSeqiYP_002287486.1. NC_011386.1.
YP_004631033.1. NC_015684.1.

Genome annotation databases

EnsemblBacteriaiACI91621; ACI91621; OCAR_4476.
AEI04792; AEI04792; OCA5_c00580.
GeneIDi10845190.
6993229.
KEGGioca:OCAR_4476.
ocg:OCA5_c00580.
PATRICi22802933. VBIOliCar134280_0452.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001196 Genomic DNA. Translation: ACI91621.1 .
CP002826 Genomic DNA. Translation: AEI04792.1 .
RefSeqi YP_002287486.1. NC_011386.1.
YP_004631033.1. NC_015684.1.

3D structure databases

ProteinModelPortali B6JCP1.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 504832.OCAR_4476.

Proteomic databases

PRIDEi B6JCP1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACI91621 ; ACI91621 ; OCAR_4476 .
AEI04792 ; AEI04792 ; OCA5_c00580 .
GeneIDi 10845190.
6993229.
KEGGi oca:OCAR_4476.
ocg:OCA5_c00580.
PATRICi 22802933. VBIOliCar134280_0452.

Phylogenomic databases

eggNOGi COG0135.
HOGENOMi HOG000161598.
KOi K01817.
OMAi DILQLHG.
OrthoDBi EOG6N94DF.

Enzyme and pathway databases

UniPathwayi UPA00035 ; UER00042 .
BioCyci OCAR504832:GJPZ-58-MONOMER.

Family and domain databases

Gene3Di 3.20.20.70. 1 hit.
HAMAPi MF_00135. PRAI.
InterProi IPR013785. Aldolase_TIM.
IPR001240. PRAI_dom.
IPR011060. RibuloseP-bd_barrel.
[Graphical view ]
Pfami PF00697. PRAI. 1 hit.
[Graphical view ]
SUPFAMi SSF51366. SSF51366. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of the chemolithoautotrophic bacterium Oligotropha carboxidovorans OM5T."
    Paul D., Bridges S., Burgess S.C., Dandass Y., Lawrence M.L.
    J. Bacteriol. 190:5531-5532(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 49405 / DSM 1227 / OM5.
  2. "Complete genome sequences of the chemolithoautotrophic Oligotropha carboxidovorans strains OM4 and OM5."
    Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G., Meyer O.
    J. Bacteriol. 193:5043-5043(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 49405 / DSM 1227 / OM5.

Entry informationi

Entry nameiTRPF_OLICO
AccessioniPrimary (citable) accession number: B6JCP1
Secondary accession number(s): F8C093
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 24, 2009
Last sequence update: December 16, 2008
Last modified: November 26, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3