B6JC85 (B6JC85_OLICO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Selenide, water dikinase HAMAP MF_00625
EC=2.7.9.3 HAMAP MF_00625

Alternative name(s):
Selenium donor protein HAMAP MF_00625
Selenophosphate synthase HAMAP MF_00625

Gene names

Name:	selD HAMAP MF_00625 EMBL ACI92301.1
Ordered Locus Names:	OCA5_c28000 EMBL AEI07493.1, OCAR_5168

Organism

Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) [Complete proteome] [HAMAP]

Taxonomic identifier

504832 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Oligotropha

Protein attributes

Sequence length	349 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Synthesizes selenophosphate from selenide and ATP By similarity. SAAS SAAS023061 HAMAP MF_00625
Catalytic activity	ATP + selenide + H2O = AMP + selenophosphate + phosphate. SAAS SAAS023061 HAMAP MF_00625
Cofactor	Magnesium By similarity. SAAS SAAS023061 HAMAP MF_00625
Sequence similarities	Belongs to the selenophosphate synthase 1 family. Class I subfamily. HAMAP MF_00625

Ontologies

Keywords
Ligand	ATP-binding SAAS SAAS023061 HAMAP MF_00625 Magnesium SAAS SAAS023061 HAMAP MF_00625 Nucleotide-binding Selenium SAAS SAAS023061 HAMAP MF_00625
Molecular function	Kinase SAAS SAAS023061 HAMAP MF_00625 EMBL ACI92301.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	ATP binding Inferred from electronic annotation. Source: HAMAP magnesium ion binding Inferred from electronic annotation. Source: HAMAP selenide, water dikinase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B6JC85 [UniParc]. Last modified December 16, 2008. Version 1. Checksum: 0B6BC866ED379035	FASTA	349	36,212
	10 20 30 40 50 60 MNAPIVRLTS LAHGGGCGCK LAPAMLQELL ADQPAAAPFR QLLVGVETGD DAAVWKIDDS 70 80 90 100 110 120 TCVVATTDFF MPVVDDPFDF GRIAATNAIS DIYAMGAKPI MALAILGMPL NKIAVDDVRK 130 140 150 160 170 180 IIAGGNTVCN AAGIPVAGGH SIDAPEPIYG LAVIGLCRPD QVRRNADAKP GDALILTKAL 190 200 210 220 230 240 GVGIYSAAIK KGELSGDGYA EMVNSTTQLN RIGSELAEDK SVHAVTDVTG FGLLGHALEL 250 260 270 280 290 300 ARGSKLTVTL NAGDVPLFTQ AAQLAQQGHV TGASTRNWAS YGEAIRLPEG LPDWQRNLLV 310 320 330 340 DPQTSGGLLV SCAADRAQAI LETIQRADYG AARIIGHTEA GPAEVRVTA

References

[1]	"Genome sequence of the chemolithoautotrophic bacterium Oligotropha carboxidovorans OM5T." Paul D., Bridges S., Burgess S.C., Dandass Y., Lawrence M.L. J. Bacteriol. 190:5531-5532(2008) [PubMed: 18539730] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 49405 / DSM 1227 / OM5 [Mississippi].
[2]	"Complete genome sequences of the chemolithoautotrophic Oligotropha carboxidovorans strains OM4 and OM5." Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G., Meyer O. J. Bacteriol. 193:5043-5043(2011) [PubMed: 21742883] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 49405 / DSM 1227 / OM5 and OM5 EMBL AEI07493.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001196 Genomic DNA. Translation: ACI92301.1. CP002826 Genomic DNA. Translation: AEI07493.1.
RefSeq	YP_002288166.1. NC_011386.1. YP_004633734.1. NC_015684.1.
3D structure databases
ProteinModelPortal	B6JC85.
ModBase	Search...
Protein-protein interaction databases
STRING	B6JC85.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	10847932. 6991156.
GenomeReviews	Gene locus OCAR_5168 in contig CP001196_GR.
KEGG	oca:OCAR_5168.
PATRIC	22804275. VBIOliCar134280_1108.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG383791.
OMA	MMAIAIL.
Family and domain databases
HAMAP	MF_00625. SelD. [Tree]
InterPro	IPR000728. AIR_synth. IPR010918. AIR_synth_C. IPR016188. PurM_N-like. IPR004536. SelD. IPR023061. SelD_I. [Graphical view]
KO	K01008.
Pfam	PF00586. AIRS. 1 hit. PF02769. AIRS_C. 1 hit. [Graphical view]
PIRSF	PIRSF036407. Selenphspht_syn. 1 hit.
SUPFAM	SSF56042. AIR_synth_C. 1 hit. SSF55326. PurM_N-like. 1 hit.
TIGRFAMs	TIGR00476. SelD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B6JC85_OLICO

Accession

Primary (citable) accession number: B6JC85

Entry history

Integrated into UniProtKB/TrEMBL:	December 16, 2008
Last sequence update:	December 16, 2008
Last modified:	January 25, 2012
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)