B6JBC3 (B6JBC3_OLICO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Phosphoheptose isomerase EMBL ACI92464.1
EC=5.3.1.- EMBL ACI92464.1

Submitted name:
Phosphoheptose isomerase GmhA EMBL AEI07339.1
EC=5.3.1.- EMBL AEI07339.1

Gene names

Name:	gmhA EMBL ACI92464.1
Ordered Locus Names:	OCA5_c26440 EMBL AEI07339.1, OCAR_5332

Organism

Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) [Complete proteome] [HAMAP]

Taxonomic identifier

504832 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Oligotropha

Protein attributes

Sequence length	197 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate By similarity. SAAS SAAS020620
Catalytic activity	D-sedoheptulose 7-phosphate = D-glycero-D-manno-heptose 7-phosphate. SAAS SAAS020620
Cofactor	Binds 1 zinc ion per subunit By similarity. SAAS SAAS020620
Pathway	Carbohydrate biosynthesis; D-glycero-D-manno-heptose 7-phosphate biosynthesis; D-glycero-alpha-D-manno-heptose 7-phosphate and D-glycero-beta-D-manno-heptose 7-phosphate from sedoheptulose 7-phosphate: step 1/1. SAAS SAAS020620
Subcellular location	Cytoplasm By similarity SAAS SAAS020620.
Sequence similarities	Contains 1 SIS domain. SAAS SAAS020620

Ontologies

Keywords
Biological process	Carbohydrate metabolism SAAS SAAS020620
Cellular component	Cytoplasm SAAS SAAS020620
Ligand	Metal-binding SAAS SAAS020620 Zinc SAAS SAAS020620
Molecular function	Isomerase SAAS SAAS020620 EMBL ACI92464.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	D-sedoheptulose 7-phosphate isomerase activity Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW sugar binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B6JBC3 [UniParc]. Last modified December 16, 2008. Version 1. Checksum: 690ACDF5364DD8CF	FASTA	197	20,737
	10 20 30 40 50 60 MSQNPIADHF QASLAGLTRA VESAELQATV KTIADAITGS LRAGNKLLLI GNGGSAADAQ 70 80 90 100 110 120 HIAAEIVGRY KRERRAWAAI ALTTDTSALT AIGNDYGIED MFARQVEGLA RPGDVLIAMT 130 140 150 160 170 180 TSGRSPNILA ALRRARELGV TTIGLTGTRG ESLRALCDHV LIAPCDDTPV IQQIHMVALH 190 AICDDVERAV MSEPGKA

References

[1]	"Genome sequence of the chemolithoautotrophic bacterium Oligotropha carboxidovorans OM5T." Paul D., Bridges S., Burgess S.C., Dandass Y., Lawrence M.L. J. Bacteriol. 190:5531-5532(2008) [PubMed: 18539730] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 49405 / DSM 1227 / OM5 [Mississippi].
[2]	"Complete genome sequences of the chemolithoautotrophic Oligotropha carboxidovorans strains OM4 and OM5." Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G., Meyer O. J. Bacteriol. 193:5043-5043(2011) [PubMed: 21742883] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 49405 / DSM 1227 / OM5 and OM5 EMBL AEI07339.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001196 Genomic DNA. Translation: ACI92464.1. CP002826 Genomic DNA. Translation: AEI07339.1.
RefSeq	YP_002288329.1. NC_011386.1. YP_004633580.1. NC_015684.1.
3D structure databases
ProteinModelPortal	B6JBC3.
ModBase	Search...
Protein-protein interaction databases
STRING	B6JBC3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	10847776. 6991319.
GenomeReviews	Gene locus OCAR_5332 in contig CP001196_GR.
KEGG	oca:OCAR_5332.
PATRIC	22804585. VBIOliCar134280_1262.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG671955.
OMA	IGRYKRD.
ProtClustDB	PRK13937.
Family and domain databases
HAMAP	MF_00067. GmhA. [Tree]
InterPro	IPR020620. Phosphoheptose_isomerase. IPR001347. SIS. [Graphical view]
KO	K03271.
Pfam	PF01380. SIS. 1 hit. [Graphical view]
PROSITE	PS51464. SIS. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B6JBC3_OLICO

Accession

Primary (citable) accession number: B6JBC3

Entry history

Integrated into UniProtKB/TrEMBL:	December 16, 2008
Last sequence update:	December 16, 2008
Last modified:	January 25, 2012
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)